RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 IL11RAQ14626 422 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 CYB5D1Q6P9G0 228 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 ZNF517Q6ZMY9 492 aaPredicted RBP7.87□□□□□ -1.15
LINC01961-201ENST00000449954 KCNMB4Q86W47 210 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 TREML1Q86YW5 311 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 TMEM102Q8N9M5 508 aaPredicted RBP7.87□□□□□ -1.15
LINC01961-201ENST00000449954 TAS1R2Q8TE23 839 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 TM9SF4Q92544 642 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 RELTQ969Z4 430 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 ISG20Q96AZ6 181 aaKnown RBP7.87□□□□□ -1.15
LINC01961-201ENST00000449954 FAM149B1Q96BN6 582 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 HSFY1Q96LI6 401 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 AGAP3Q96P47 875 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 WRAP53Q9BUR4 548 aaKnown RBP7.87□□□□□ -1.15
LINC01961-201ENST00000449954 LHX9Q9NQ69 397 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 LNPEPQ9UIQ6 1025 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 LIMCH1Q9UPQ0 1083 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 NTNG1Q9Y2I2 539 aa7.87□□□□□ -1.15
LINC01961-201ENST00000449954 O00370 1275 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 PDE2AO00408 941 aaPredicted RBP7.86□□□□□ -1.15
LINC01961-201ENST00000449954 RGS9O75916 674 aaPredicted RBP7.86□□□□□ -1.15
LINC01961-201ENST00000449954 TMEM63AO94886 807 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 RHOBTB3O94955 611 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 PCCBP05166 539 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 TRIM49P0CI25 452 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 TRIM49CP0CI26 452 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 NID1P14543 1247 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 CCR1P32246 355 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 VAMP7P51809 220 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 RPS15P62841 145 aaKnown RBP7.86□□□□□ -1.15
LINC01961-201ENST00000449954 AUHQ13825 339 aaKnown RBP7.86□□□□□ -1.15
LINC01961-201ENST00000449954 KNOP1Q1ED39 458 aaKnown RBP7.86□□□□□ -1.15
LINC01961-201ENST00000449954 C5orf22Q49AR2 442 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 ANKRD40Q6AI12 368 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 IGFL3Q6UXB1 125 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 MED25Q71SY5 747 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 MRGPRGQ86SM5 289 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 TTC7BQ86TV6 843 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 RASGRP3Q8IV61 690 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 NAGSQ8N159 534 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 UBA3Q8TBC4 463 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 CLEC4CQ8WTT0 213 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 SLC35F5Q8WV83 523 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 SLC38A3Q99624 504 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 CXXC4Q9H2H0 198 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 TNMDQ9H2S6 317 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 ZSCAN16Q9H4T2 348 aaPredicted RBP7.86□□□□□ -1.15
LINC01961-201ENST00000449954 TRNAU1APQ9NX07 287 aaKnown RBP7.86□□□□□ -1.15
LINC01961-201ENST00000449954 VANGL2Q9ULK5 521 aa7.86□□□□□ -1.15
LINC01961-201ENST00000449954 RTTNQ86VV8 2226 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 K7ELQ4 463 aaPredicted RBP7.85□□□□□ -1.15
LINC01961-201ENST00000449954 ZNF185O15231 689 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 IPO13O94829 963 aaKnown RBP7.85□□□□□ -1.15
LINC01961-201ENST00000449954 ADCY5O95622 1261 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 TRUB2O95900 331 aaKnown RBP7.85□□□□□ -1.15
LINC01961-201ENST00000449954 UGT2B4P06133 528 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 RARAP10276 462 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 VDRP11473 427 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 CD19P15391 556 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 GATA4P43694 442 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 GLRBP48167 497 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 RGS7P49802 495 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 IRAK1P51617 712 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 EIF4EBP2Q13542 120 aaPredicted RBP7.85□□□□□ -1.15
LINC01961-201ENST00000449954 IL10RAQ13651 578 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 PCSK7Q16549 785 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 OCLNQ16625 522 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.85□□□□□ -1.15
LINC01961-201ENST00000449954 TMEM52BQ4KMG9 183 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 LRRC73Q5JTD7 316 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 PMF1Q6P1K2 205 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 LCLAT1Q6UWP7 414 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 ZNF783Q6ZMS7 281 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 CENPQQ7L2Z9 268 aaPredicted RBP7.85□□□□□ -1.15
LINC01961-201ENST00000449954 NRROSQ86YC3 692 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 CEP97Q8IW35 865 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 RYBPQ8N488 228 aaPredicted RBP7.85□□□□□ -1.15
LINC01961-201ENST00000449954 OR2AP1Q8NGE2 309 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 PATE1Q8WXA2 126 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 FUBP1Q96AE4 644 aaKnown RBP7.85□□□□□ -1.15
LINC01961-201ENST00000449954 KLHL32Q96NJ5 620 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 FOXC2Q99958 501 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 TM6SF2Q9BZW4 377 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 SAP130Q9H0E3 1048 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 EPB41L1Q9H4G0 881 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 GSX1Q9H4S2 264 aaPredicted RBP7.85□□□□□ -1.15
LINC01961-201ENST00000449954 WDR26Q9H7D7 661 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 CARS2Q9HA77 564 aaKnown RBP7.85□□□□□ -1.15
LINC01961-201ENST00000449954 DLL4Q9NR61 685 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 ARHGEF38Q9NXL2 777 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 ZFATQ9P243 1243 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 ZNHIT2Q9UHR6 403 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 MOSPD1Q9UJG1 213 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 KIAA1257Q9ULG3 409 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 NEU2Q9Y3R4 380 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 ANKRD36A6QL64 1941 aa7.85□□□□□ -1.15
LINC01961-201ENST00000449954 FER1L5A0AVI2 2057 aa7.84□□□□□ -1.15
LINC01961-201ENST00000449954 A0A0D9SEW6 157 aa7.84□□□□□ -1.15
LINC01961-201ENST00000449954 KRIT1O00522 736 aa7.84□□□□□ -1.15
LINC01961-201ENST00000449954 TOX3O15405 576 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms