RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 RIN3Q8TB24 985 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 IMP4Q96G21 291 aaKnown RBP11.31□□□□□ -0.6
SYVN1-204ENST00000449943 DCUN1D5Q9BTE7 237 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 ERVK-6Q9BXR3 956 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 SMOC2Q9H3U7 446 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 OLAHQ9NV23 265 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 OSER1Q9NX31 292 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 ANGPTL3Q9Y5C1 460 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 CEP350Q5VT06 3117 aa11.31□□□□□ -0.6
SYVN1-204ENST00000449943 MYADML2A6NDP7 307 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 SUPT3HB4E1H0 165 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 BNIP3LO60238 219 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 SUPT3HO75486 399 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 CDK14O94921 469 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 ZNF865P0CJ78 1059 aaPredicted RBP11.3□□□□□ -0.6
SYVN1-204ENST00000449943 MTHFD1P11586 935 aaKnown RBP11.3□□□□□ -0.6
SYVN1-204ENST00000449943 HGFP14210 728 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 GPR15P49685 360 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 NOGQ13253 232 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 DDR2Q16832 855 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 MANEALQ5VSG8 457 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 CLVS1Q8IUQ0 354 aaPredicted RBP11.3□□□□□ -0.6
SYVN1-204ENST00000449943 DNAJB14Q8TBM8 379 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 SARDHQ9UL12 918 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 TIMM22Q9Y584 194 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 MYLKQ15746 1914 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 BAIAP3O94812 1187 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 NCK1P16333 377 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 PSMD8P48556 350 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 APLP1P51693 650 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 EFEMP1Q12805 493 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 OR4D1Q15615 310 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 SLC39A12Q504Y0 691 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 EGFL6Q8IUX8 553 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 OR13C4Q8NGS5 318 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 TMEM169Q96HH4 297 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 HMX1Q9NP08 348 aaPredicted RBP11.3□□□□□ -0.6
SYVN1-204ENST00000449943 FAM50BQ9Y247 325 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 NDUFAF1Q9Y375 327 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 H3BMM5 538 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 AZIN1O14977 448 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 INPP4BO15327 924 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 GOT2P00505 430 aaKnown RBP11.3□□□□□ -0.6
SYVN1-204ENST00000449943 CAPNS1P04632 268 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 PSMA4P25789 261 aaKnown RBP11.3□□□□□ -0.6
SYVN1-204ENST00000449943 CD52P31358 61 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 INPP5AQ14642 412 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 USP41Q3LFD5 358 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 ERMP1Q7Z2K6 904 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 VPS33AQ96AX1 596 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 CLK4Q9HAZ1 481 aaKnown RBP11.3□□□□□ -0.6
SYVN1-204ENST00000449943 MRGBPQ9NV56 204 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 DUS2Q9NX74 493 aaKnown RBP11.3□□□□□ -0.6
SYVN1-204ENST00000449943 MAP10Q9P2G4 905 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 LSM7Q9UK45 103 aaKnown RBP11.3□□□□□ -0.6
SYVN1-204ENST00000449943 PRRG1O14668 218 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 SH3BP5O60239 455 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 GLP2RO95838 553 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 TBX18O95935 607 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 IL10P22301 178 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 OXTRP30559 389 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 HOXC13P31276 330 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 OFCC1Q8IZS5 231 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 SMOXQ9NWM0 555 aa11.3□□□□□ -0.6
SYVN1-204ENST00000449943 TSR3Q9UJK0 312 aaKnown RBP11.3□□□□□ -0.6
SYVN1-204ENST00000449943 PENKP01210 267 aaPredicted RBP11.29□□□□□ -0.6
SYVN1-204ENST00000449943 CD1DP15813 335 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 RPL9P32969 192 aaKnown RBP11.29□□□□□ -0.6
SYVN1-204ENST00000449943 RAP1GAP2Q684P5 730 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 TRMOQ9BU70 441 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 TRIM15Q9C019 465 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 PADI4Q9UM07 663 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 A0A1B0GTL3 188 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 SLC7A4O43246 635 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 NNMTP40261 264 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 DIO3P55073 304 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 MLLT6P55198 1093 aaPredicted RBP11.29□□□□□ -0.6
SYVN1-204ENST00000449943 SP3Q02447 781 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 RAD51Q06609 339 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 CYP51A1Q16850 503 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 CTXN3Q4LDR2 81 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 C10orf120Q5SQS8 335 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 ZNF549Q6P9A3 640 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 SLC15A3Q8IY34 581 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 ATP6V0D2Q8N8Y2 350 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 DCBLD1Q8N8Z6 715 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 RSPH1Q8WYR4 309 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 FBXL20Q96IG2 436 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 PTPN18Q99952 460 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 SEMA3CQ99985 751 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 MFSD1Q9H3U5 465 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 SOX17Q9H6I2 414 aaPredicted RBP11.29□□□□□ -0.6
SYVN1-204ENST00000449943 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.29□□□□□ -0.62e-10■■■□□ 15.7
SYVN1-204ENST00000449943 FAF1Q9UNN5 650 aaPredicted RBP11.29□□□□□ -0.6
SYVN1-204ENST00000449943 GIT1Q9Y2X7 761 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 CD3EAPO15446 510 aaKnown RBP11.29□□□□□ -0.6
SYVN1-204ENST00000449943 PEX11BO96011 259 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 EEF1DP29692 281 aaKnown RBP11.29□□□□□ -0.6
SYVN1-204ENST00000449943 TBX4P57082 545 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 PURAQ00577 322 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms