RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 C6orf52Q5T4I8 152 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 SATL1Q86VE3 508 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 RETREG3Q86VR2 466 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 LGI2Q8N0V4 545 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 GALNT4Q8N4A0 578 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 GPATCH1Q9BRR8 931 aaKnown RBP16.89■□□□□ 0.3
TOM1-210ENST00000449058 PLK2Q9NYY3 685 aa16.89■□□□□ 0.3
TOM1-210ENST00000449058 A0A0D9SEW6 157 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 TLR5O60602 858 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 ACLYP53396 1101 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 FOXA1P55317 472 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 GPR17Q13304 367 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 SETMARQ53H47 684 aaPredicted RBP16.89■□□□□ 0.29
TOM1-210ENST00000449058 IRAK1BP1Q5VVH5 260 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 LAYNQ6UX15 382 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 CFAP52Q8N1V2 620 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 NAT14Q8WUY8 206 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 TWIST2Q8WVJ9 160 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 KIAA1191Q96A73 305 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 CNBD2Q96M20 576 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 PRICKLE1Q96MT3 831 aaPredicted RBP16.89■□□□□ 0.29
TOM1-210ENST00000449058 SEPT5Q99719 369 aaPredicted RBP16.89■□□□□ 0.29
TOM1-210ENST00000449058 SH3GL3Q99963 347 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 MAGEH1Q9H213 219 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 MED16Q9Y2X0 877 aa16.89■□□□□ 0.29
TOM1-210ENST00000449058 F5H5T6 163 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 PIP5K1BO14986 540 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 KERAO60938 352 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 TNFAIP8O95379 198 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 TFAP2AP05549 437 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 PRSS56P0CW18 603 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 PSMA3P25788 255 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 KCNQ1P51787 676 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 SLC7A2P52569 658 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 GK3PQ14409 553 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 USP41Q3LFD5 358 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 RSPO2Q6UXX9 243 aaPredicted RBP16.88■□□□□ 0.29
TOM1-210ENST00000449058 RNF19BQ6ZMZ0 732 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 PCYOX1LQ8NBM8 494 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 LRTOMTQ8WZ04 291 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 NSMCE3Q96MG7 304 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 NSUN5Q96P11 429 aaKnown RBP16.88■□□□□ 0.29
TOM1-210ENST00000449058 DERL2Q9GZP9 239 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 TUBB1Q9H4B7 451 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 TMEM161AQ9NX61 479 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 MAP10Q9P2G4 905 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 LZTS1Q9Y250 596 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 SPO11Q9Y5K1 396 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 PTGDR2Q9Y5Y4 395 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 COMMD3-BMI1R4GMX3 469 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 CEP350Q5VT06 3117 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 A0A0J9YYE9 177 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 TMEM88BA6NKF7 163 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 PGM3O95394 542 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 SLC6A4P31645 630 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 RPL5P46777 297 aaKnown RBP16.88■□□□□ 0.29
TOM1-210ENST00000449058 GNA12Q03113 381 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 EME1Q96AY2 570 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 ZNF597Q96LX8 424 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 PSKH2Q96QS6 385 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 SYTL2Q9HCH5 934 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 SEPT3Q9UH03 358 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 ACTL7AQ9Y615 435 aa16.88■□□□□ 0.29
TOM1-210ENST00000449058 TBC1D4O60343 1298 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 CLASP2O75122 1294 aaKnown RBP16.87■□□□□ 0.29
TOM1-210ENST00000449058 COL6A1P12109 1028 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 GRB7Q14451 532 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 HERC6Q8IVU3 1022 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 BBS5Q8N3I7 341 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 OR7D4Q8NG98 312 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 STAG3L4Q8TBR4 150 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 SLC39A3Q9BRY0 314 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 MRPS26Q9BYN8 205 aaKnown RBP16.87■□□□□ 0.29
TOM1-210ENST00000449058 RETREG1Q9H6L5 497 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 ABCD2Q9UBJ2 740 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 LCHNA4D1U4 455 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 ACSL4O60488 711 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 MATN4O95460 622 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 CLPTM1O96005 669 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 FAM58BPP0C7Q3 252 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 GFAPP14136 432 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 ELNP15502 786 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 RGRP47804 291 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 TM4SF4P48230 202 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 KIF19Q2TAC6 998 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 PAQR3Q6TCH7 311 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 CYP2R1Q6VVX0 501 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 MIER2Q8N344 545 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 TRPC4APQ8TEL6 797 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 PBXIP1Q96AQ6 731 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 CYP2S1Q96SQ9 504 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 COQ10BQ9H8M1 238 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 SDR39U1Q9NRG7 319 aaPredicted RBP16.87■□□□□ 0.29
TOM1-210ENST00000449058 MARCH5Q9NX47 278 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 TAS2R13Q9NYV9 303 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 GIMAP2Q9UG22 337 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 IKZF3Q9UKT9 509 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 NDUFAF1Q9Y375 327 aa16.87■□□□□ 0.29
TOM1-210ENST00000449058 C7orf72A4D263 438 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 H3BNC9 293 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms