RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CDYL2Q8N8U2 506 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 PWWP2AQ96N64 755 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 KCNK13Q9HB14 408 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ABHD10Q9NUJ1 306 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 HS3ST4Q9Y661 456 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 C5orf58C9J3I9 102 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 NARSO43776 548 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CCNB1P14635 433 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 COMTP21964 271 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 LPOP22079 712 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ITPKAP23677 461 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 TYK2P29597 1187 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 MAPK7Q13164 816 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 TRIM71Q2Q1W2 868 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 PMF1Q6P1K2 205 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC4A11Q8NBS3 891 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 SMRP1Q8NCR6 262 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 RIN3Q8TB24 985 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 DLG3Q92796 817 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 TEX12Q9BXU0 123 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 FRMD8Q9BZ67 464 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 TRABDQ9H4I3 376 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 CALCOCO1Q9P1Z2 691 aa5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 V9GYY5 206 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-209ENST00000448940 ESPNB1AK53 854 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 PLK4O00444 970 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 AOC1P19801 751 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 DR1Q01658 176 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 KIAA1161Q6NSJ0 714 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 CEP70Q8NHQ1 597 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 FRMD8P1Q9BZ68 369 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 OCEL1Q9H607 264 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 FBXO4Q9UKT5 387 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 PSME2Q9UL46 239 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 MMP17Q9ULZ9 603 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 HPSEQ9Y251 543 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 RAI2Q9Y5P3 530 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 MYH7P12883 1935 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 UPK3BL1B0FP48 263 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 TMEM150CB9EJG8 249 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 UPK3BL2E5RIL1 263 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 MAP2K7O14733 419 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC25A12O75746 678 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 OR6A2O95222 327 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 SEC24AO95486 1093 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 CD63P08962 238 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 SPTBP11277 2137 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 HLA-DPA1P20036 260 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 L1CAMP32004 1257 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 CTBP2P56545 445 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 RING1Q06587 406 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 MTAPQ13126 283 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 TTC23Q5W5X9 447 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 FBXL22Q6P050 247 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 PACS1Q6VY07 963 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 CIR1Q86X95 450 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZSWIM2Q8NEG5 633 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 RFWD2Q8NHY2 731 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 FAM174AQ8TBP5 190 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 BTBD9Q96Q07 612 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 NAT9Q9BTE0 207 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 IRX2Q9BZI1 471 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 FOXP3Q9BZS1 431 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 UBAP1Q9NZ09 502 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 MYH4Q9Y623 1939 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 IQANK1A0A1B0GTG1 560 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 ANKDD1BA6NHY2 528 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 MMP20O60882 483 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 MATN4O95460 622 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 FGF1P05230 155 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 HBQ1P09105 142 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 ACP5P13686 325 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 SERPINH1P50454 418 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 SUOXP51687 545 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 ILF2Q12905 390 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 USP10Q14694 798 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 RFTN1Q14699 578 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 PHLDB3Q6NSJ2 640 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 LRRC8EQ6NSJ5 796 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 TOR1AIP2Q8NFQ8 470 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 IFI44Q8TCB0 444 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 KCNV2Q8TDN2 545 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 C1orf54Q8WWF1 131 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 ATL1Q8WXF7 558 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 TTYH3Q9C0H2 523 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 SAYSD1Q9NPB0 183 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 PSMD13Q9UNM6 376 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 BDP1A6H8Y1 2624 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 SMAPO00193 183 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 HGSO14964 777 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 FANCGO15287 622 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 ADAM12O43184 909 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 ARHGEF9O43307 516 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 CSO75390 466 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 CYP17A1P05093 508 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 ITPKBP27987 946 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 FBXO38Q6PIJ6 1188 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 HORMAD1Q86X24 394 aa5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 RAVER1Q8IY67 606 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-209ENST00000448940 CFAP206Q8IYR0 622 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms