RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 CCR10P46092 362 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 ERVK-21P61565 698 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 SNRPD1P62314 119 aaKnown RBP17.66■□□□□ 0.42
LMNA-208ENST00000448611 CDKN3Q16667 212 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 SETMARQ53H47 684 aaPredicted RBP17.66■□□□□ 0.42
LMNA-208ENST00000448611 ISCA2Q86U28 154 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 ZSWIM9Q86XI8 627 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 LSMEM2Q8N112 164 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 OTUB2Q96DC9 234 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 BIRC8Q96P09 236 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 TUBB6Q9BUF5 446 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 ILKAPQ9H0C8 392 aaPredicted RBP17.66■□□□□ 0.42
LMNA-208ENST00000448611 POMKQ9H5K3 350 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 MARK1Q9P0L2 795 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 ARMCX1Q9P291 453 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 VPS9D1Q9Y2B5 631 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 WNT6Q9Y6F9 365 aa17.66■□□□□ 0.42
LMNA-208ENST00000448611 CAPN14A8MX76 684 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 HNRNPCL1O60812 293 aaKnown RBP17.65■□□□□ 0.42
LMNA-208ENST00000448611 CD1DP15813 335 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 KCNA5P22460 613 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 MPSTP25325 297 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 SERPINA4P29622 427 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 TTPAP49638 278 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 ELF3P78545 371 aaPredicted RBP17.65■□□□□ 0.42
LMNA-208ENST00000448611 MYLK3Q32MK0 819 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 ZRANB3Q5FWF4 1079 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 ELMSAN1Q6PJG2 1045 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 ADIPOR2Q86V24 386 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 RYBPQ8N488 228 aaPredicted RBP17.65■□□□□ 0.42
LMNA-208ENST00000448611 ZNF557Q8N988 423 aaPredicted RBP17.65■□□□□ 0.42
LMNA-208ENST00000448611 ITFG1Q8TB96 612 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 TUBGCP5Q96RT8 1024 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 C19orf43Q9BQ61 176 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 CEP44Q9C0F1 390 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 SLC25A13Q9UJS0 675 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 FNDC3AQ9Y2H6 1198 aaKnown RBP17.65■□□□□ 0.42
LMNA-208ENST00000448611 MRPS23Q9Y3D9 190 aaKnown RBP17.65■□□□□ 0.42
LMNA-208ENST00000448611 MYOFQ9NZM1 2061 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 CHD9Q3L8U1 2897 aa17.65■□□□□ 0.42
LMNA-208ENST00000448611 A8MT66 165 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 NPHS1O60500 1241 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 SRP72O76094 671 aaKnown RBP17.64■□□□□ 0.42
LMNA-208ENST00000448611 HNF1BP35680 557 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 KCNC1P48547 511 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 DMC1Q14565 340 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 VWA5B1Q5TIE3 1220 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 CYB5D1Q6P9G0 228 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 TRIM67Q6ZTA4 783 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 KIAA0907Q7Z7F0 614 aaPredicted RBP17.64■□□□□ 0.42
LMNA-208ENST00000448611 CCDC126Q96EE4 140 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 NSL1Q96IY1 281 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 PBX4Q9BYU1 374 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 ALG9Q9H6U8 611 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 COG4Q9H9E3 785 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 ZFYVE1Q9HBF4 777 aa17.64■□□□□ 0.42
LMNA-208ENST00000448611 CAPN8A6NHC0 703 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 ZBTB14O43829 449 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 IPO13O94829 963 aaKnown RBP17.64■□□□□ 0.41
LMNA-208ENST00000448611 KRT16P08779 473 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 RASSF2P50749 326 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 RPL14P50914 215 aaKnown RBP17.64■□□□□ 0.41
LMNA-208ENST00000448611 ECT2LQ008S8 904 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 CACNG1Q06432 222 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 SULT2A1Q06520 285 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 PRKAA1Q13131 559 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 PDAP1Q13442 181 aaKnown RBP17.64■□□□□ 0.41
LMNA-208ENST00000448611 PTPRNQ16849 979 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 AARS2Q5JTZ9 985 aaKnown RBP17.64■□□□□ 0.41
LMNA-208ENST00000448611 EPGNQ6UW88 154 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 PIWIL4Q7Z3Z4 852 aaKnown RBP17.64■□□□□ 0.41
LMNA-208ENST00000448611 PACS2Q86VP3 889 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 TREML1Q86YW5 311 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 PCDH20Q8N6Y1 951 aaKnown RBP17.64■□□□□ 0.41
LMNA-208ENST00000448611 PTERQ96BW5 349 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 FAM136AQ96C01 138 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 ECHDC3Q96DC8 303 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 LRRC3BQ96PB8 259 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 CCDC106Q9BWC9 280 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 CCDC68Q9H2F9 335 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 TAS2R13Q9NYV9 303 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 NCKIPSDQ9NZQ3 722 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 SLCO3A1Q9UIG8 710 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 APOBEC2Q9Y235 224 aaKnown RBP17.64■□□□□ 0.41
LMNA-208ENST00000448611 YBX2Q9Y2T7 364 aaKnown RBP17.64■□□□□ 0.41
LMNA-208ENST00000448611 GBF1Q92538 1859 aa17.64■□□□□ 0.41
LMNA-208ENST00000448611 C1orf232A0A0U1RR37 186 aa17.63■□□□□ 0.41
LMNA-208ENST00000448611 MATN2O00339 956 aa17.63■□□□□ 0.41
LMNA-208ENST00000448611 PFDN6O15212 129 aa17.63■□□□□ 0.41
LMNA-208ENST00000448611 OR1I1O60431 355 aa17.63■□□□□ 0.41
LMNA-208ENST00000448611 RHOBTB1O94844 696 aa17.63■□□□□ 0.41
LMNA-208ENST00000448611 SERPINB5P36952 375 aa17.63■□□□□ 0.41
LMNA-208ENST00000448611 HK2P52789 917 aa17.63■□□□□ 0.41
LMNA-208ENST00000448611 ALDH18A1P54886 795 aaKnown RBP17.63■□□□□ 0.41
LMNA-208ENST00000448611 ADARP55265 1226 aaKnown RBP17.63■□□□□ 0.41
LMNA-208ENST00000448611 CTSL3PQ5NE16 218 aa17.63■□□□□ 0.41
LMNA-208ENST00000448611 TMEM215Q68D42 235 aa17.63■□□□□ 0.41
LMNA-208ENST00000448611 CCNYL1Q8N7R7 359 aa17.63■□□□□ 0.41
LMNA-208ENST00000448611 C12orf76Q8N812 135 aaPredicted RBP17.63■□□□□ 0.41
LMNA-208ENST00000448611 MAPK15Q8TD08 544 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms