RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 ABCG8Q9H221 673 aa13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 EIF2B3Q9NR50 452 aaKnown RBP13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 PHPT1Q9NRX4 125 aaPredicted RBP13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 RXFP3Q9NSD7 469 aa13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 DNAAF2Q9NVR5 837 aaKnown RBP13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 CD84Q9UIB8 345 aa13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 CDV3Q9UKY7 258 aaKnown RBP13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 SPO11Q9Y5K1 396 aa13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 DMDP11532 3685 aa13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 RALGAPA1Q6GYQ0 2036 aa13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 OTOGLQ3ZCN5 2332 aa13.05□□□□□ -0.32
ERGIC3-209ENST00000447986 ZFHX2Q9C0A1 2572 aaPredicted RBP13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 C4orf47A7E2U8 309 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 H3BM21 787 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 CDX4O14627 284 aaPredicted RBP13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 SUN1O94901 812 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 ZNF883P0CG24 379 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 DEKP35659 375 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 TRIM23P36406 574 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 CCT8P50990 548 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 DCDC1P59894 354 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 SARNPP82979 210 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 CDK16Q00536 496 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 GPS1Q13098 491 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 TAF1AQ15573 450 aaPredicted RBP13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 TRIP13Q15645 432 aaPredicted RBP13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 UAP1L1Q3KQV9 507 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 MACC1Q6ZN28 852 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 SPATS2Q86XZ4 545 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 SLC22A18ASQ8N1D0 253 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 PLA2G15Q8NCC3 412 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 ZNF592Q92610 1267 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 PLEKHG4BQ96PX9 1271 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 DDX47Q9H0S4 455 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 GPR27Q9NS67 375 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 TM7SF3Q9NS93 570 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 PCYOX1Q9UHG3 505 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 OR1A2Q9Y585 309 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 VPS13AQ96RL7 3174 aa13.04□□□□□ -0.32
ERGIC3-209ENST00000447986 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 A0A1B0GTQ1 180 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 STX7O15400 261 aaKnown RBP13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 HOXC4P09017 264 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 MYCLP1P12525 358 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 LPOP22079 712 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 VPS41P49754 854 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 BLKP51451 505 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 KIAA1024LP59773 190 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 OLIG2Q13516 323 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 LAMB3Q13751 1172 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 NFATC4Q14934 902 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 SYDE1Q6ZW31 735 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 KLHL7Q8IXQ5 586 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 BTN2A2Q8WVV5 523 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 SLCO2A1Q92959 643 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 SCAMP4Q969E2 229 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 ZSCAN5AQ9BUG6 496 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 RIOK2Q9BVS4 552 aaKnown RBP13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 SPATA16Q9BXB7 569 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 DNAJC28Q9NX36 388 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 NFKBIL1Q9UBC1 381 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 GON4LQ3T8J9 2241 aa13.03□□□□□ -0.32
ERGIC3-209ENST00000447986 AURKAO14965 403 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 SPAM1P38567 509 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 HADHAP40939 763 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 RXRGP48443 463 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 HNRNPKP61978 463 aaKnown RBP eCLIP13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 DR1Q01658 176 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 PPARDQ03181 441 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 CKAP4Q07065 602 aaKnown RBP13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 FZD2Q14332 565 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 INAVAQ3KP66 663 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 HENMT1Q5T8I9 393 aaKnown RBP13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 PDPK2PQ6A1A2 396 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 DENND5AQ6IQ26 1287 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 ENPP7Q6UWV6 458 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 ADAMTSL4Q6UY14 1074 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 HEATR4Q86WZ0 1026 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 TTC30BQ8N4P2 665 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 TRAM1L1Q8N609 369 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 GPR26Q8NDV2 337 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 OR52K1Q8NGK4 314 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 OR2I1PQ8NGU4 316 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 EID2BQ96D98 161 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 WDR92Q96MX6 357 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 C19orf43Q9BQ61 176 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 TEX101Q9BY14 249 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 IL21RQ9HBE5 538 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 IL17CQ9P0M4 197 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 ASIC3Q9UHC3 531 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 FNDC3AQ9Y2H6 1198 aaKnown RBP13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 PCDHGB2Q9Y5G2 931 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 PCDH15Q96QU1 1955 aa13.02□□□□□ -0.32
ERGIC3-209ENST00000447986 K7ESM1 405 aa13.02□□□□□ -0.33
ERGIC3-209ENST00000447986 CSF2P04141 144 aa13.02□□□□□ -0.33
ERGIC3-209ENST00000447986 NME1P15531 152 aaKnown RBP13.02□□□□□ -0.33
ERGIC3-209ENST00000447986 BPIP17213 487 aa13.02□□□□□ -0.33
ERGIC3-209ENST00000447986 TPSB2P20231 275 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms