RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 KATNA1O75449 491 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 DNAJB5O75953 348 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 ADRA1BP35368 520 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 KRT9P35527 623 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 ADCY8P40145 1251 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 GNPDA1P46926 289 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 GABRB2P47870 512 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 NDST2P52849 883 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 POLR2LP62875 67 aaKnown RBP7.06□□□□□ -1.28
LRRC28-203ENST00000447360 PTK2Q05397 1052 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 RALGDSQ12967 914 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 IL11RAQ14626 422 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 ZRANB3Q5FWF4 1079 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 SNAP47Q5SQN1 464 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-203ENST00000447360 FAM102AQ5T9C2 384 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-203ENST00000447360 DPY19L2P1Q6NXN4 242 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 JMJD6Q6NYC1 403 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-203ENST00000447360 ARCQ7LC44 396 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 TMEM135Q86UB9 458 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 SLC47A2Q86VL8 602 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 ZC3H18Q86VM9 953 aaKnown RBP7.06□□□□□ -1.28
LRRC28-203ENST00000447360 HPS6Q86YV9 775 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 SFRP1Q8N474 314 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 MLKLQ8NB16 471 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 GPT2Q8TD30 523 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 NCSTNQ92542 709 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 C18orf8Q96DM3 657 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 STAMBPL1Q96FJ0 436 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 TEX101Q9BY14 249 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 TRIM55Q9BYV6 548 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 FRMD8Q9BZ67 464 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-203ENST00000447360 EPB41L1Q9H4G0 881 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 SLAMF7Q9NQ25 335 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 SIDT1Q9NXL6 827 aaKnown RBP7.06□□□□□ -1.28
LRRC28-203ENST00000447360 LHX3Q9UBR4 397 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 PADI1Q9ULC6 663 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 SUFUQ9UMX1 484 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 NEU3Q9UQ49 428 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 SLC17A4Q9Y2C5 497 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 ZNF451Q9Y4E5 1061 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.06□□□□□ -1.28
LRRC28-203ENST00000447360 CCDC168Q8NDH2 2452 aa7.06□□□□□ -1.28
LRRC28-203ENST00000447360 NIPBLQ6KC79 2804 aaeCLIP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 ARHGEF17Q96PE2 2063 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 LRP4O75096 1905 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 SHANK1Q9Y566 2161 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 GOLGA6L3A6NEY3 463 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 BUB1BO60566 1050 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 DPM1O60762 260 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 LRIG2O94898 1065 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 CBX6O95503 412 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 FGFR1OPO95684 399 aaKnown RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 MT-ND3P03897 115 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 IVLP07476 585 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 ANKRD34CP0C6C1 535 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 CCNYL3P0C7X3 344 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 PRF1P14222 555 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 GM2AP17900 193 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 SLC9A1P19634 815 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 NFKBIAP25963 317 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 TEAD1P28347 426 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 SERPINA4P29622 427 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 CASP14P31944 242 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 FLT3P36888 993 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 USP8P40818 1118 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 GARSP41250 739 aaKnown RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 ACTR1BP42025 376 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 PPM1FP49593 454 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 EPHA4P54764 986 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 YBEYP58557 167 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 ACTR1AP61163 376 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 APBA1Q02410 837 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 CYTH1Q15438 398 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 CHRNA6Q15825 494 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 DPCR1Q3MIW9 517 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 PRR30Q53SZ7 412 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 GJB7Q6PEY0 223 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 DPPA4Q7L190 304 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 ZSWIM9Q86XI8 627 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 ZNF354CQ86Y25 554 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 CAMK1DQ8IU85 385 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 PLXDC1Q8IUK5 500 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 TP53INP2Q8IXH6 220 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 PELI3Q8N2H9 469 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 Q8NA96 180 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 GALNT6Q8NCL4 622 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 SLC37A2Q8TED4 501 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 PDCD6IPQ8WUM4 868 aaKnown RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 SHC3Q92529 594 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 PNPLA2Q96AD5 504 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 SH3KBP1Q96B97 665 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 ECHDC3Q96DC8 303 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 TBC1D31Q96DN5 1066 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 SCARF2Q96GP6 870 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 EXOC2Q96KP1 924 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 CFAP57Q96MR6 1250 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 CRACR2AQ9BSW2 395 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 RUBCNLQ9H714 662 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 ATP13A3Q9H7F0 1226 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms