RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TRAT1Q6PIZ9 186 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 TSSK4Q6SA08 328 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 PET117Q6UWS5 81 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 MOB3CQ70IA8 216 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 TECPR1Q7Z6L1 1165 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 GLRX5Q86SX6 157 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 FAM160B2Q86V87 743 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 CAMK1DQ8IU85 385 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 RBFAQ8N0V3 343 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 CADM3Q8N126 398 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 TMEM199Q8N511 208 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 TMCO5AQ8N6Q1 288 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 LPAR1Q92633 364 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 SECISBP2LQ93073 1101 aaKnown RBP4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 FER1L6-AS2Q96M78 137 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 SRSF8Q9BRL6 282 aaKnown RBP4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 THUMPD3Q9BV44 507 aaKnown RBP4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 SEZ6LQ9BYH1 1024 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 GLIS2Q9BZE0 524 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 ISCUQ9H1K1 167 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 MVB12BQ9H7P6 319 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 BABAM1Q9NWV8 329 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 OGFRQ9NZT2 677 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 DLGAP2Q9P1A6 1054 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 SEC63Q9UGP8 760 aaKnown RBP4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 HAO1Q9UJM8 370 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 ANAPC2Q9UJX6 822 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 TNFRSF18Q9Y5U5 241 aa4.55□□□□□ -1.68
HMGB1P48-201ENST00000446155 A0A096LPK6 155 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 TRBC2A0A5B9 178 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 LCATP04180 440 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 HEXAP06865 529 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 THEGLP0DJG4 465 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 ENO3P13929 434 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 ARSBP15848 533 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 PTAFRP25105 342 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 RFX5P48382 616 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 PIP4K2AP48426 406 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 GNAQP50148 359 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 F2RL1P55085 397 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 TMPRSS3P57727 454 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 TRAF1Q13077 416 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 SNTB1Q13884 538 aaKnown RBP4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 SLMAPQ14BN4 828 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 C15orf59Q2T9L4 293 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 SERTAD4-AS1Q5TG53 156 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 NCAPH2Q6IBW4 605 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 GLDNQ6ZMI3 551 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 GSTA5Q7RTV2 222 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 PIM3Q86V86 326 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 PELI3Q8N2H9 469 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 C7orf57Q8NEG2 295 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 MOSPD2Q8NHP6 518 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 KIF18AQ8NI77 898 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 ZKSCAN4Q969J2 545 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 FAM162AQ96A26 154 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 CCDC47Q96A33 483 aaKnown RBP4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 TMCO6Q96DC7 493 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 TBC1D31Q96DN5 1066 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 CAMK1GQ96NX5 476 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 DGAT2Q96PD7 388 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 H2AFJQ9BTM1 129 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 MSTO1Q9BUK6 570 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 POLDIP3Q9BY77 421 aaKnown RBP4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 DNAI2Q9GZS0 605 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 ST6GALNAC4Q9H4F1 302 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 KRCC1Q9NPI7 259 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 PFDN4Q9NQP4 134 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 WSB2Q9NYS7 404 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 ABI3Q9P2A4 366 aa4.54□□□□□ -1.68
HMGB1P48-201ENST00000446155 FAM90A8PA6NJQ4 464 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 B4DGG1 531 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 H0YGN5 161 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 IFNL4K9M1U5 179 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 CHL1O00533 1208 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 LDB2O43679 373 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 FMO6PO60774 539 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 C22orf31O95567 290 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 MT-ND3P03897 115 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 FAM90A13PP0C7W8 464 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 FAM90A24PP0C7X0 464 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 IRF1P10914 325 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 KRT10P13645 584 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 PTPN2P17706 415 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 HOXA13P31271 388 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 RFC1P35251 1148 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 CXCR3P49682 368 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 CAMPP49913 170 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 ALDH3A2P51648 485 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 CDH12P55289 794 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 CLDN2P57739 230 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 LINC00205P59089 165 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 ZP1P60852 638 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 FAM27E3Q08E93 113 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 AP1B1Q10567 949 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 ALCAMQ13740 583 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 RUNX2Q13950 521 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 ZNF284Q2VY69 593 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 ZSCAN23Q3MJ62 389 aa4.53□□□□□ -1.68
HMGB1P48-201ENST00000446155 CRY2Q49AN0 593 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms