RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 KREMEN2Q8NCW0 462 aa13.65□□□□□ -0.22
RBM39-216ENST00000444878 WDR60Q8WVS4 1066 aa13.65□□□□□ -0.22
RBM39-216ENST00000444878 STON2Q8WXE9 905 aa13.65□□□□□ -0.22
RBM39-216ENST00000444878 USP13Q92995 863 aaPredicted RBP13.65□□□□□ -0.22
RBM39-216ENST00000444878 EXT2Q93063 718 aa13.65□□□□□ -0.22
RBM39-216ENST00000444878 ACDQ96AP0 544 aa13.65□□□□□ -0.22
RBM39-216ENST00000444878 CCDC28BQ9BUN5 200 aa13.65□□□□□ -0.22
RBM39-216ENST00000444878 EBF2Q9HAK2 575 aa13.65□□□□□ -0.22
RBM39-216ENST00000444878 DNMT3BQ9UBC3 853 aaKnown RBP13.65□□□□□ -0.22
RBM39-216ENST00000444878 FAM50BQ9Y247 325 aa13.65□□□□□ -0.22
RBM39-216ENST00000444878 FIS1Q9Y3D6 152 aa13.65□□□□□ -0.22
RBM39-216ENST00000444878 K7ERQ8 282 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 CSPG5O95196 566 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 PENKP01210 267 aaPredicted RBP13.64□□□□□ -0.23
RBM39-216ENST00000444878 COX4I1P13073 169 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 IMPDH1P20839 514 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 SP100P23497 879 aaPredicted RBP13.64□□□□□ -0.23
RBM39-216ENST00000444878 TTPAP49638 278 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 CDKN1CP49918 316 aaPredicted RBP13.64□□□□□ -0.23
RBM39-216ENST00000444878 AP1S1P61966 158 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 PTPRRQ15256 657 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 ZRANB3Q5FWF4 1079 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 ARMC12Q5T9G4 340 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 FRMD7Q6ZUT3 714 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 STMN2Q93045 179 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 ARMC5Q96C12 935 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 FAR2Q96K12 515 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 CLPTM1LQ96KA5 538 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 CORO1BQ9BR76 489 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 G3BP2Q9UN86 482 aaKnown RBP13.64□□□□□ -0.23
RBM39-216ENST00000444878 PRRC2BQ5JSZ5 2229 aaKnown RBP13.64□□□□□ -0.23
RBM39-216ENST00000444878 FZD6O60353 706 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 SUPT7LO94864 414 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 LINC00271P0C7V0 271 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 HTRA4P83105 476 aaPredicted RBP13.64□□□□□ -0.23
RBM39-216ENST00000444878 SULT2A1Q06520 285 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 GALNT1Q10472 559 aaPredicted RBP13.64□□□□□ -0.23
RBM39-216ENST00000444878 PTPRNQ16849 979 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 MPP7Q5T2T1 576 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 PSAPL1Q6NUJ1 521 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 RPS27LQ71UM5 84 aaKnown RBP13.64□□□□□ -0.23
RBM39-216ENST00000444878 CUZD1Q86UP6 607 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 TTC30BQ8N4P2 665 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 PAF1Q8N7H5 531 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 OR6K2Q8NGY2 324 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 RHEBL1Q8TAI7 183 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 LENG8Q96PV6 779 aaPredicted RBP13.64□□□□□ -0.23
RBM39-216ENST00000444878 TRMOQ9BU70 441 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 GPR63Q9BZJ6 419 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 ASAH2Q9NR71 780 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 PKP3Q9Y446 797 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 PIKFYVEQ9Y2I7 2098 aa13.64□□□□□ -0.23
RBM39-216ENST00000444878 CCL16O15467 120 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 SMAD6O43541 496 aaKnown RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 PYGLP06737 847 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 PPARGP37231 505 aaPredicted RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 NFKB2Q00653 900 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 LMAN2Q12907 356 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 PEX6Q13608 980 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 CUL3Q13618 768 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 ACCSLQ4AC99 568 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 ZNF678Q5SXM1 525 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 PAQR3Q6TCH7 311 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 NET1Q7Z628 596 aaPredicted RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 CAMK1DQ8IU85 385 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 PIANPQ8IYJ0 282 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 L3HYPDHQ96EM0 354 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 MYO19Q96H55 970 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 TCF25Q9BQ70 676 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 TACO1Q9BSH4 297 aaKnown RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 EMILIN2Q9BXX0 1053 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 TFB2MQ9H5Q4 396 aaKnown RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 SLC7A8Q9UHI5 535 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 EVLQ9UI08 416 aaPredicted RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 CLEC4EQ9ULY5 219 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 ARHGAP26Q9UNA1 814 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 ZNF711Q9Y462 761 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 INSL6Q9Y581 213 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 A0A0U1RQS6 177 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 TTC36A6NLP5 189 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 H3BMM5 538 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 H7C0S8 307 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 LEFTY2O00292 366 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 SKAP2O75563 359 aaPredicted RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 PGLSO95336 258 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 GLUD1P00367 558 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 FGBP02675 491 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 THRAP10827 490 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 CTPS1P17812 591 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 PIK3R1P27986 724 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 HERVK_113P63132 956 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 RAD51Q06609 339 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 BCL2L1Q07817 233 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 OR4D1Q15615 310 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 ZRSR2Q15696 482 aaKnown RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 TRMT5Q32P41 509 aaKnown RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 AARS2Q5JTZ9 985 aaKnown RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 TMEM198Q66K66 360 aa13.63□□□□□ -0.23
RBM39-216ENST00000444878 RAB44Q7Z6P3 723 aaPredicted RBP13.63□□□□□ -0.23
RBM39-216ENST00000444878 CEP70Q8NHQ1 597 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms