RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 BLOC1S5Q8TDH9 187 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 RHBDD1Q8TEB9 315 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 SAP25Q8TEE9 199 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 GRK7Q8WTQ7 553 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 MAGOHBQ96A72 148 aaKnown RBP10.8□□□□□ -0.68
HDAC6-211ENST00000443563 FUBP1Q96AE4 644 aaKnown RBP10.8□□□□□ -0.68
HDAC6-211ENST00000443563 MS4A14Q96JA4 679 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 PLEKHG4BQ96PX9 1271 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 SMIM14Q96QK8 99 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 CDC6Q99741 560 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 GORASP1Q9BQQ3 440 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 ZSCAN5AQ9BUG6 496 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 TEX101Q9BY14 249 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 ARNT2Q9HBZ2 717 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 KLQ9UEF7 1012 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 APOBEC3BQ9UH17 382 aaKnown RBP10.8□□□□□ -0.68
HDAC6-211ENST00000443563 CD84Q9UIB8 345 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 PKP3Q9Y446 797 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 OR1A2Q9Y585 309 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 SAR1BQ9Y6B6 198 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 CEP250Q9BV73 2442 aa10.8□□□□□ -0.68
HDAC6-211ENST00000443563 A0A0U1RQS6 177 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 AP3B1O00203 1094 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 SH3BP5O60239 455 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 PIAS2O75928 621 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 CRTAMO95727 393 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 SLC4A1P02730 911 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 CTSEP14091 401 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 DGKAP23743 735 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 PAFAH1B1P43034 410 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 CHRNA4P43681 627 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 SRP54P61011 504 aaKnown RBP10.79□□□□□ -0.68
HDAC6-211ENST00000443563 BNIP3Q12983 259 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 EIF2B5Q13144 721 aaKnown RBP10.79□□□□□ -0.68
HDAC6-211ENST00000443563 SHBQ15464 509 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 CYP1B1Q16678 543 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 HENMT1Q5T8I9 393 aaKnown RBP10.79□□□□□ -0.68
HDAC6-211ENST00000443563 KCTD11Q693B1 232 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 CCDC137Q6PK04 289 aaKnown RBP10.79□□□□□ -0.68
HDAC6-211ENST00000443563 DGLUCYQ7Z3D6 616 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 HEATR4Q86WZ0 1026 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 PHACTR4Q8IZ21 702 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 PDCD7Q8N8D1 485 aaKnown RBP10.79□□□□□ -0.68
HDAC6-211ENST00000443563 BRSK1Q8TDC3 778 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 COG1Q8WTW3 980 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 TRIM44Q96DX7 344 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-211ENST00000443563 HIC2Q96JB3 615 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 C19orf43Q9BQ61 176 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 DUSP23Q9BVJ7 150 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 RIOK2Q9BVS4 552 aaKnown RBP10.79□□□□□ -0.68
HDAC6-211ENST00000443563 ETNK1Q9HBU6 452 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 RAB6BQ9NRW1 208 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 SPASTQ9UBP0 616 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 RNF14Q9UBS8 474 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 PCOLCE2Q9UKZ9 415 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 SPO11Q9Y5K1 396 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 CSNK1G3Q9Y6M4 447 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 LRP4O75096 1905 aa10.79□□□□□ -0.68
HDAC6-211ENST00000443563 ZNF106Q9H2Y7 1883 aaKnown RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 ASCC3Q8N3C0 2202 aaKnown RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 TDRD6O60522 2096 aaKnown RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 DCDC2BA2VCK2 349 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 K7ESM1 405 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 STX7O15400 261 aaKnown RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 AQP9O43315 295 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 PHF2O75151 1096 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 KCNK5O95279 499 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 LPOP22079 712 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 RPL22P35268 128 aaKnown RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 COILP38432 576 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 KCNJ1P48048 391 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 FNTAP49354 379 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 NOVA1P51513 510 aaKnown RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 HK3P52790 923 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 CDK3Q00526 305 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 CDH17Q12864 832 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 SEMA5AQ13591 1074 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 LAMB3Q13751 1172 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 ELOCQ15369 112 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 TAF1AQ15573 450 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 PRRT3Q5FWE3 981 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 TPRG1LQ5T0D9 272 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 PPP1R21Q6ZMI0 780 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 ERMP1Q7Z2K6 904 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 GATAD2AQ86YP4 633 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 HID1Q8IV36 788 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 FSTL5Q8N475 847 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 TTC30BQ8N4P2 665 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 TRAM1L1Q8N609 369 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 DNAAF3Q8N9W5 541 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 ZNF548Q8NEK5 533 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 DEFB124Q8NES8 71 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 DTX3LQ8TDB6 740 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 SCG3Q8WXD2 468 aaKnown RBP10.78□□□□□ -0.68
HDAC6-211ENST00000443563 SCAMP4Q969E2 229 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 RUNDC3BQ96NL0 473 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 WDR24Q96S15 920 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 SPATA16Q9BXB7 569 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 AP1M1Q9BXS5 423 aa10.78□□□□□ -0.68
HDAC6-211ENST00000443563 EVA1BQ9NVM1 165 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms