RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 IL4RP24394 825 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 CTNNA2P26232 953 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 CTNNA1P35221 906 aaKnown RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 TERF1P54274 439 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 EPHB1P54762 984 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 RALGDSQ12967 914 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 DPYSL3Q14195 570 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 PDK2Q15119 407 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 LONRF1Q17RB8 773 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 ANKRD20A8PQ5CZ79 823 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 LRRC38Q5VT99 294 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 TIGD7Q6NT04 549 aaPredicted RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 USP45Q70EL2 814 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 GKN2Q86XP6 184 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 ANKMY2Q8IV38 441 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 SLC35F3Q8IY50 421 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 PGBD5Q8N414 524 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 CCNYQ8ND76 341 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 OR56A4Q8NGH8 313 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 PCDH19Q8TAB3 1148 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 TBATAQ96M53 351 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 WDR24Q96S15 920 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 SEMA3CQ99985 751 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 ZNF670Q9BS34 389 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 CLPBQ9H078 707 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 GOLPH3Q9H4A6 298 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 SUDS3Q9H7L9 328 aaPredicted RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 PADI4Q9UM07 663 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 PHTF1Q9UMS5 762 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 PCDHB1Q9Y5F3 818 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 LY6G6EA0A0G2JKS1 128 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 HTRA2O43464 458 aaPredicted RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 BRINP1O60477 761 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 CSO75390 466 aaKnown RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 MPOP05164 745 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 CELA2BP08218 269 aaPredicted RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 CR2P20023 1033 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 MX2P20592 715 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 TGM2P21980 687 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 GARSP41250 739 aaKnown RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 RTP5Q14D33 572 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 RALGPS1Q5JS13 557 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 SEL1L2Q5TEA6 688 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 FUBP1Q96AE4 644 aaKnown RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 NUS1Q96E22 293 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 PDXPQ96GD0 296 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 HES6Q96HZ4 224 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 RBM41Q96IZ5 413 aaKnown RBP8.76□□□□□ -1.01
USP6NL-203ENST00000443016 NSMCE3Q96MG7 304 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 BOCQ9BWV1 1114 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 EGFL7Q9UHF1 273 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 GPR34Q9UPC5 381 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 U3KQA8 63 aa8.76□□□□□ -1.01
USP6NL-203ENST00000443016 MGAQ8IWI9 3026 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 LRRD1A4D1F6 860 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 TMEM202A6NGA9 273 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 VIPR1P32241 457 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 ACTN2P35609 894 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 ABCG1P45844 678 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 RWDD2BP57060 319 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 TAS2R40P59535 323 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 GUCA2AQ02747 115 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 TRAF2Q12933 501 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 TUBB2AQ13885 445 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 NR6A1Q15406 480 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 NCBP2-AS2Q69YL0 99 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 PNCKQ6P2M8 343 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 LVRNQ6Q4G3 990 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 TAF8Q7Z7C8 310 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 PCGF5Q86SE9 256 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 CPNE8Q86YQ8 564 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 ARL10Q8N8L6 244 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 FAM46DQ8NEK8 389 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 FGF11Q92914 225 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 SCRN2Q96FV2 425 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 SRPK1Q96SB4 655 aaKnown RBP8.75□□□□□ -1.01
USP6NL-203ENST00000443016 TUBB2BQ9BVA1 445 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 MAK16Q9BXY0 300 aaKnown RBP8.75□□□□□ -1.01
USP6NL-203ENST00000443016 CYP4F12Q9HCS2 524 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 MRPL40Q9NQ50 206 aaKnown RBP8.75□□□□□ -1.01
USP6NL-203ENST00000443016 PHPT1Q9NRX4 125 aaPredicted RBP8.75□□□□□ -1.01
USP6NL-203ENST00000443016 RBM22Q9NW64 420 aaKnown RBP eCLIP8.75□□□□□ -1.01
USP6NL-203ENST00000443016 KCTD5Q9NXV2 234 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 RAI2Q9Y5P3 530 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 RP1P56715 2156 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 KALRNO60229 2985 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 MATN3O15232 486 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 HEXIM1O94992 359 aaKnown RBP8.75□□□□□ -1.01
USP6NL-203ENST00000443016 PGLSO95336 258 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 KRT1P04264 644 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 ATP1A1P05023 1023 aaKnown RBP8.75□□□□□ -1.01
USP6NL-203ENST00000443016 CCNB1P14635 433 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 CTPS1P17812 591 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 CA4P22748 312 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 ETV3P41162 512 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 GABREP78334 506 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 GALNT2Q10471 571 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 SPIDRQ14159 915 aa8.75□□□□□ -1.01
USP6NL-203ENST00000443016 PAFAH1B3Q15102 231 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms