RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SLC7A9P82251 487 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 SRSF3P84103 164 aaKnown RBP4.87□□□□□ -1.63
PTPN4-206ENST00000441089 IFRD2Q12894 506 aaPredicted RBP4.87□□□□□ -1.63
PTPN4-206ENST00000441089 ZXDCQ2QGD7 858 aaPredicted RBP4.87□□□□□ -1.63
PTPN4-206ENST00000441089 FUT11Q495W5 492 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 CCDC14Q49A88 953 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 ATP13A4Q4VNC1 1196 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 ADGRF1Q5T601 910 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 C1QL3Q5VWW1 255 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 SYPL2Q5VXT5 272 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 PAPD7Q5XG87 772 aaKnown RBP4.87□□□□□ -1.63
PTPN4-206ENST00000441089 AADACL2Q6P093 401 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 BNIPLQ7Z465 357 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 DAAM2Q86T65 1068 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 MIB1Q86YT6 1006 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 TMPRSS6Q8IU80 811 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 ZDHHC17Q8IUH5 632 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 DEFB106AQ8N104 65 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 SIX6OS1Q8N1H7 587 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 NIPA2Q8N8Q9 360 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 MSANTD4Q8NCY6 345 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 TRIM58Q8NG06 486 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 FNIP1Q8TF40 1166 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 COG1Q8WTW3 980 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 HES6Q96HZ4 224 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 SPATA17Q96L03 361 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 CFAP57Q96MR6 1250 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 ALS2CR12Q96Q35 445 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 PEBP4Q96S96 227 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 ACOX2Q99424 681 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 PSMB7Q99436 277 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 NAPGQ99747 312 aaPredicted RBP4.87□□□□□ -1.63
PTPN4-206ENST00000441089 HERPUD2Q9BSE4 406 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 HDAC8Q9BY41 377 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 MAGEB5Q9BZ81 275 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 DNAI2Q9GZS0 605 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 MKRN2Q9H000 416 aaKnown RBP4.87□□□□□ -1.63
PTPN4-206ENST00000441089 ABCG4Q9H172 646 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 SYNCQ9H7C4 482 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 MRPL47Q9HD33 250 aaKnown RBP4.87□□□□□ -1.63
PTPN4-206ENST00000441089 ANLNQ9NQW6 1124 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 CNGB3Q9NQW8 809 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 ASNSD1Q9NWL6 643 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 OSER1Q9NX31 292 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 SMARCAL1Q9NZC9 954 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 EHD2Q9NZN4 543 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 PHTF1Q9UMS5 762 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 SATB2Q9UPW6 733 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 NAALADL1Q9UQQ1 740 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 ZNF281Q9Y2X9 895 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 JRKLQ9Y4A0 524 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 RAD54BQ9Y620 910 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 SCN8AQ9UQD0 1980 aa4.87□□□□□ -1.63
PTPN4-206ENST00000441089 ARHGEF17Q96PE2 2063 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 A0A1W2PQH9 124 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 CTAGE9A4FU28 777 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 C2orf78A6NCI8 922 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 WIPF3A6NGB9 483 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 I6L893 689 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 KIF2AO00139 706 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 SYNCRIPO60506 623 aaKnown RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 TSPAN3O60637 253 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 HSF2BPO75031 334 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 VPS4BO75351 444 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 URI1O94763 535 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 SEMA4FO95754 770 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 LTFP02788 710 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 TUBB4AP04350 444 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 GP1BAP07359 652 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 ITGA2BP08514 1039 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 ZDHHC11BP0C7U3 371 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 THEGLP0DJG4 465 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 PDGFRAP16234 1089 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 MIPP30301 263 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 VIPR1P32241 457 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 CXCR5P32302 372 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 CTNNA1P35221 906 aaKnown RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 SLC1A1P43005 524 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 RXRGP48443 463 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 PPP3CCP48454 512 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 ZNF143P52747 638 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 HDAC4P56524 1084 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 SLC8A3P57103 927 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 YWHAGP61981 247 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 SLC25A11Q02978 314 aaKnown RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 CHRNEQ04844 493 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 KCNAB2Q13303 367 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 EIF4EBP2Q13542 120 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 PIGHQ14442 188 aaPredicted RBP4.86□□□□□ -1.63
PTPN4-206ENST00000441089 ISXQ2M1V0 245 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 ANO4Q32M45 955 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 KCNT1Q5JUK3 1230 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 EFHC1Q5JVL4 640 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 BSPRYQ5W0U4 402 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 BORAQ6PGQ7 559 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 DCUN1D2Q6PH85 259 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 LAYNQ6UX15 382 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 ARCQ7LC44 396 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 PEX26Q7Z412 305 aa4.86□□□□□ -1.63
PTPN4-206ENST00000441089 C14orf80Q86SX3 495 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms