RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 HOXC10Q9NYD6 342 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 NENFQ9UMX5 172 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 SCAF8Q9UPN6 1271 aaKnown RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 TMEM98Q9Y2Y6 226 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 PCDHA10Q9Y5I2 948 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 ARFGEF1Q9Y6D6 1849 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 SMIM35A0A1B0GVV1 85 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 AQP7P3A6NL99 342 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 CCDC169A6NNP5 214 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 LRRIQ3A6PVS8 624 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMCO5BA8MYB1 307 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 F8VZ95 297 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 H0YCG3 227 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 H3BQF6 201 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ATP2A1O14983 1001 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC16A4O15374 487 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TIMM44O43615 452 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 USP12O75317 370 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 STAM2O75886 525 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 FTCDO95954 541 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 CCNE2O96020 404 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 POLBP06746 335 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMEM191BP0C7N4 346 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TRIM49P0CI25 452 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TRIM49CP0CI26 452 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 HOXB6P17509 224 aaKnown RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 IL1R2P27930 398 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TNFRSF8P28908 595 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 GKP32189 559 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ABCD1P33897 745 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TNNT3P45378 269 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 GCLMP48507 274 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 AARSP49588 968 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 PNLIPRP1P54315 467 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 GALCP54803 685 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 PEX3P56589 373 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ENPEPQ07075 957 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 KCTD2Q14681 263 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TAF12Q16514 161 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 UGCGQ16739 394 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ST3GAL2Q16842 350 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 SUPT20HL1Q3ZLR7 823 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 CBWD6Q4V339 395 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ARHGAP15Q53QZ3 475 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 CBWD3Q5JTY5 395 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 CBWD5Q5RIA9 395 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 DCAF12L1Q5VU92 463 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 CACHD1Q5VU97 1274 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ALS2CLQ60I27 953 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 KRT39Q6A163 491 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 FCRL6Q6DN72 434 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 SNRNP48Q6IEG0 339 aaKnown RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 C8orf74Q6P047 294 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 EMBQ6PCB8 327 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMEM65Q6PI78 240 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 PTCHD4Q6ZW05 846 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 RNF44Q7L0R7 432 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 PEX26Q7Z412 305 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLFN11Q7Z7L1 901 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TBC1D1Q86TI0 1168 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 MOGAT3Q86VF5 341 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 CPOQ8IVL8 374 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 LMO3Q8TAP4 145 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 LNX1Q8TBB1 728 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ACTRT1Q8TDG2 376 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 AENQ8WTP8 325 aaKnown RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 HDAC7Q8WUI4 952 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 CTNNBL1Q8WYA6 563 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 HERVK_113Q902F9 699 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 KIFAP3Q92845 792 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ATP6V0A1Q93050 837 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZKSCAN4Q969J2 545 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 PPP2R3CQ969Q6 453 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 EXOC4Q96A65 974 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 EID2BQ96D98 161 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 LRRC46Q96FV0 321 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 MS4A14Q96JA4 679 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 HS6ST2Q96MM7 605 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 INPP4AQ96PE3 977 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 PSMB7Q99436 277 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 AGPAT1Q99943 283 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 CBWD1Q9BRT8 395 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 NTPCRQ9BSD7 190 aaKnown RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 C17orf80Q9BSJ5 609 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 GPR88Q9GZN0 384 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 FAM83DQ9H4H8 585 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 ACAD9Q9H845 621 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 C17orf75Q9HAS0 396 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 UBE2TQ9NPD8 197 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 UBN1Q9NPG3 1134 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 WASH6PQ9NQA3 447 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 XPNPEP3Q9NQH7 507 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 GDF3Q9NR23 364 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 PSD3Q9NYI0 1048 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 SMARCAL1Q9NZC9 954 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 EHD2Q9NZN4 543 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMOD4Q9NZQ9 345 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 VPS18Q9P253 973 aa3.58□□□□□ -1.84
HMGB3P11-201ENST00000440127 IFT80Q9P2H3 777 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms