RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 IYDQ6PHW0 289 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 PQLC1Q8N2U9 271 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 FSTL5Q8N475 847 aaPredicted RBP14.16□□□□□ -0.14
LIMD1-202ENST00000440097 SNRNP27Q8WVK2 155 aaKnown RBP14.16□□□□□ -0.14
LIMD1-202ENST00000440097 FEM1CQ96JP0 617 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 ZFRQ96KR1 1074 aaKnown RBP14.16□□□□□ -0.14
LIMD1-202ENST00000440097 PSKH2Q96QS6 385 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 OMDQ99983 421 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 TIMMDC1Q9NPL8 285 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 XPR1Q9UBH6 696 aa14.16□□□□□ -0.14
LIMD1-202ENST00000440097 G3V2L1 256 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 H3BNC9 293 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 MAGEB3O15480 346 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 SNAP91O60641 907 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 LRG1P02750 347 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 APOA4P06727 396 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 GJA8P48165 433 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 PPP3CCP48454 512 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 TCEAL8Q8IYN2 117 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 CMTM5Q96DZ9 223 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 RANBP9Q96S59 729 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 PRPF18Q99633 342 aaKnown RBP14.15□□□□□ -0.14
LIMD1-202ENST00000440097 SIKE1Q9BRV8 207 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 Q9H521 79 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 PCDHGC4Q9Y5F7 938 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 AP4B1Q9Y6B7 739 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 CNPP09543 421 aaKnown RBP14.15□□□□□ -0.14
LIMD1-202ENST00000440097 SLC5A2P31639 672 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 C5orf22Q49AR2 442 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 NAPRTQ6XQN6 538 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 KIAA0408Q6ZU52 694 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 SETD3Q86TU7 594 aaPredicted RBP14.15□□□□□ -0.14
LIMD1-202ENST00000440097 CILP2Q8IUL8 1156 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 CENPLQ8N0S6 344 aaPredicted RBP14.15□□□□□ -0.14
LIMD1-202ENST00000440097 PHTF2Q8N3S3 785 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 OR13C4Q8NGS5 318 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 MRPS31Q92665 395 aaKnown RBP14.15□□□□□ -0.14
LIMD1-202ENST00000440097 TMA16Q96EY4 203 aaKnown RBP14.15□□□□□ -0.14
LIMD1-202ENST00000440097 MGME1Q9BQP7 344 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 MRPL1Q9BYD6 325 aaKnown RBP14.15□□□□□ -0.14
LIMD1-202ENST00000440097 PSMD13Q9UNM6 376 aa14.15□□□□□ -0.14
LIMD1-202ENST00000440097 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.14□□□□□ -0.15
LIMD1-202ENST00000440097 INSIG1O15503 277 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 TGM5O43548 720 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 LDB2O43679 373 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 EFCAB14O75071 495 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 PAPSS2O95340 614 aaPredicted RBP14.14□□□□□ -0.15
LIMD1-202ENST00000440097 TNFAIP8O95379 198 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 GLP2RO95838 553 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 HNRNPCP07910 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
LIMD1-202ENST00000440097 GJA1P17302 382 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 NAGLUP54802 743 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 MTTPP55157 894 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 POU4F1Q01851 419 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 DCTN2Q13561 401 aaKnown RBP14.14□□□□□ -0.15
LIMD1-202ENST00000440097 FSCBQ5H9T9 825 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 LRRC8EQ6NSJ5 796 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 TMEM150AQ86TG1 271 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 CCNYL1Q8N7R7 359 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 LPCAT1Q8NF37 534 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 PPP1R36Q96LQ0 422 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 STN1Q9H668 368 aaKnown RBP14.14□□□□□ -0.15
LIMD1-202ENST00000440097 RC3H2Q9HBD1 1191 aaKnown RBP14.14□□□□□ -0.15
LIMD1-202ENST00000440097 TMEM165Q9HC07 324 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 PLK2Q9NYY3 685 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 MARCH4Q9P2E8 410 aaPredicted RBP14.14□□□□□ -0.15
LIMD1-202ENST00000440097 BLOC1S6Q9UL45 172 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 MROH6A6NGR9 719 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 SLC7A4O43246 635 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 NDST3O95803 873 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 MZF1P28698 734 aaPredicted RBP14.14□□□□□ -0.15
LIMD1-202ENST00000440097 SULT2A1Q06520 285 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 CHST9Q7L1S5 443 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 AHI1Q8N157 1196 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 EFHBQ8N7U6 833 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 ZNF781Q8N8C0 355 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 DDI1Q8WTU0 396 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 SORT1Q99523 831 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.14□□□□□ -0.15
LIMD1-202ENST00000440097 C6orf203Q9P0P8 240 aaPredicted RBP14.14□□□□□ -0.15
LIMD1-202ENST00000440097 RAB26Q9ULW5 256 aa14.14□□□□□ -0.15
LIMD1-202ENST00000440097 ARHGAP10A1A4S6 786 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 H3BSA7 217 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 GOT2P00505 430 aaKnown RBP14.13□□□□□ -0.15
LIMD1-202ENST00000440097 GRIA4P48058 902 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 GLT6D1Q7Z4J2 308 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 NECAB2Q7Z6G3 386 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 FIBCD1Q8N539 461 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 BRSK1Q8TDC3 778 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 GATA5Q9BWX5 397 aaPredicted RBP14.13□□□□□ -0.15
LIMD1-202ENST00000440097 C1QTNF1Q9BXJ1 281 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 ZNF696Q9H7X3 374 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 OXSMQ9NWU1 459 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 LSM7Q9UK45 103 aaKnown RBP14.13□□□□□ -0.15
LIMD1-202ENST00000440097 PCDHGA4Q9Y5G9 962 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 TTC36A6NLP5 189 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 DCXO43602 365 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 CXCL14O95715 111 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 EPOP01588 193 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 F11P03951 625 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms