RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 CRCPO75575 148 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 ASGR1P07306 291 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 ZNF37AP17032 561 aaPredicted RBP13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 EEF1DP29692 281 aaKnown RBP13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC5A2P31639 672 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 ARL1P40616 181 aaPredicted RBP13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 PLIN5Q00G26 463 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 ZNF235Q14590 738 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 TSNQ15631 228 aaKnown RBP13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 TMEM126BQ8IUX1 230 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 PBXIP1Q96AQ6 731 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 ZNF597Q96LX8 424 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 C1orf50Q9BV19 199 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 MARCH2Q9P0N8 246 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 CDC7O00311 574 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 SCAMP3O14828 347 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 GPR39O43194 453 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 HTRA2O43464 458 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 KCNQ1P51787 676 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 NDST2P52849 883 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 TAF10Q12962 218 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 SLC14A2Q15849 920 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 FAM45BPQ6NSW5 357 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 MSANTD2Q6P1R3 559 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 SLC15A3Q8IY34 581 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 SCML4Q8N228 414 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 FAM45AQ8TCE6 357 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 FBXO32Q969P5 355 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 RMDN1Q96DB5 314 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 C1orf74Q96LT6 269 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 SEPT5Q99719 369 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 UPF3AQ9H1J1 476 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 SOX17Q9H6I2 414 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 CCSER2Q9H7U1 834 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 TMEM248Q9NWD8 314 aa13.52□□□□□ -0.25
HERPUD1-204ENST00000439977 HNRNPRO43390 633 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 RHOBTB1O94844 696 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 STAMBPO95630 424 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 ASLP04424 464 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 FDXRP22570 491 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 PBX3P40426 434 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 HSPA13P48723 471 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 APOFQ13790 326 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 UGT3A1Q6NUS8 523 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 BEND5Q7L4P6 421 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 PCYOX1LQ8NBM8 494 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 OR7D4Q8NG98 312 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 OR2T34Q8NGX1 318 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 OR2T3Q8NH03 318 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 OR4L1Q8NH43 312 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 GABPB2Q8TAK5 448 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 L3HYPDHQ96EM0 354 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 ZFRQ96KR1 1074 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 NSMCE3Q96MG7 304 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 SARS2Q9NP81 518 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 OLAHQ9NV23 265 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 CMTM6Q9NX76 183 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 NDUFA13Q9P0J0 144 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 POLG2Q9UHN1 485 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 SARDHQ9UL12 918 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 RNF112Q9ULX5 631 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 RNF103-CHMP3A0A140T963 221 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 HSPA8P11142 646 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 RGRP47804 291 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 SCNN1BP51168 640 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 ZNF157P51786 506 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 MRNIPQ6NTE8 343 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 ARHGAP22Q7Z5H3 698 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 MIER2Q8N344 545 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 GIPC2Q8TF65 315 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 TMEM74Q96NL1 305 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 PPP1R2P1Q96PQ5 205 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 CDK15Q96Q40 435 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 SLC30A3Q99726 388 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 POLR1EQ9GZS1 481 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 BPIFA1Q9NP55 256 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 CATSPERZQ9NTU4 200 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 DUS2Q9NX74 493 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 PTTG2Q9NZH5 202 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 HCSTQ9UBK5 93 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 NDUFAF1Q9Y375 327 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 SPO11Q9Y5K1 396 aa13.51□□□□□ -0.25
HERPUD1-204ENST00000439977 LOC285095A0A1B0GVY8 99 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 INPP4BO15327 924 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 WISP3O95389 354 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 CAPNS1P04632 268 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 PSMD8P48556 350 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 NR1H2P55055 460 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 KCNA10Q16322 511 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 CST9Q5W186 159 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 RAB44Q7Z6P3 723 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 ZNF786Q8N393 782 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 B4GALNT2Q8NHY0 566 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 ZBED2Q9BTP6 218 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 EFHD1Q9BUP0 239 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 CRISPLD1Q9H336 500 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 SCML2Q9UQR0 700 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 Q9Y3F1 56 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 ANKRD12Q6UB98 2062 aa13.5□□□□□ -0.25
HERPUD1-204ENST00000439977 FXYD1O00168 92 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms