RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 DEFB124Q8NES8 71 aa19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 SAP25Q8TEE9 199 aa19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 SETD7Q8WTS6 366 aaKnown RBP19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 CAMK1GQ96NX5 476 aa19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 LGR4Q9BXB1 951 aa19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 FAM83DQ9H4H8 585 aa19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 WDR26Q9H7D7 661 aa19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 BPIFA1Q9NP55 256 aa19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 PAK5Q9P286 719 aa19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 BTBD3Q9Y2F9 522 aa19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 ZNF106Q9H2Y7 1883 aaKnown RBP19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 PLXNB3Q9ULL4 1909 aa19.41■□□□□ 0.7
SEMA3B-206ENST00000439487 RGSL1A5PLK6 1076 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 CACNB4O00305 520 aaPredicted RBP19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 YKT6O15498 198 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 PSMD3O43242 534 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 SOD1P00441 154 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 CSF2P04141 144 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 HTR1BP28222 390 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 FDFT1P37268 417 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 KIAA1024LP59773 190 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 ALS2CLQ60I27 953 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 GLT6D1Q7Z4J2 308 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 PIP4P1Q86T03 277 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 NLRP8Q86W28 1048 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 NAXDQ8IW45 347 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 ATL2Q8NHH9 583 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 LRRC45Q96CN5 670 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 CAPZA3Q96KX2 299 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 WDR92Q96MX6 357 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 TCEAL2Q9H3H9 227 aaPredicted RBP19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 TRABDQ9H4I3 376 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 LRRC40Q9H9A6 602 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 PHPT1Q9NRX4 125 aaPredicted RBP19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 HACD3Q9P035 362 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 SAR1BQ9Y6B6 198 aa19.4■□□□□ 0.7
SEMA3B-206ENST00000439487 TMEM202A6NGA9 273 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 BUD23O43709 281 aaKnown RBP19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 PIAS2O75928 621 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 AP2A1O95782 977 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 HOXC4P09017 264 aaPredicted RBP19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 NME1P15531 152 aaKnown RBP19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 JUNDP17535 347 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 TEAD1P28347 426 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 COILP38432 576 aaPredicted RBP19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 CDK3Q00526 305 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 CYP1B1Q16678 543 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 KANSL1Q7Z3B3 1105 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 RBFAQ8N0V3 343 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 GPR26Q8NDV2 337 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 TSACCQ96A04 125 aaPredicted RBP19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 TEX101Q9BY14 249 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 RAB6BQ9NRW1 208 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 UCKL1Q9NWZ5 548 aa19.39■□□□□ 0.69
SEMA3B-206ENST00000439487 INPP4BO15327 924 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 FLRT2O43155 660 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 MYCLP1P12525 358 aaPredicted RBP19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 BPIP17213 487 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 DGKAP23743 735 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 HMGCLP35914 325 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 LMAN1P49257 510 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 HNRNPKP61978 463 aaKnown RBP eCLIP19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 PPARDQ03181 441 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 MSLNQ13421 630 aaPredicted RBP19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 TRIP13Q15645 432 aaPredicted RBP19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 ALG11Q2TAA5 492 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 HENMT1Q5T8I9 393 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 KCTD16Q68DU8 428 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 ADAMTSL4Q6UY14 1074 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 RD3Q7Z3Z2 195 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 HID1Q8IV36 788 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 PHACTR4Q8IZ21 702 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 OR56A4Q8NGH8 313 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 RHBDD1Q8TEB9 315 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 ARNT2Q9HBZ2 717 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 PIH1D1Q9NWS0 290 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 IL17CQ9P0M4 197 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 KLQ9UEF7 1012 aa19.38■□□□□ 0.69
SEMA3B-206ENST00000439487 GOLGA6L10A0A0M3HER8 536 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 FADS2P1A8MWK0 482 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 E7EVH7 732 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 H3BM21 787 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 GIPC1O14908 333 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 SCAMP1O15126 338 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 PHF2O75151 1096 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 TPH1P17752 444 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 CSRP1P21291 193 aaKnown RBP19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 KCNA4P22459 653 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 SRP54P61011 504 aaKnown RBP19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 FOXK2Q01167 660 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 SEMA5AQ13591 1074 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 PTPRCAPQ14761 206 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 CCDC137Q6PK04 289 aaKnown RBP19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 TRIM74Q86UV6 250 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 CREG2Q8IUH2 290 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 SLC25A45Q8N413 288 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 EID2Q8N6I1 236 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 OR1E3Q8WZA6 343 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 PDXPQ96GD0 296 aa19.37■□□□□ 0.69
SEMA3B-206ENST00000439487 SPATA16Q9BXB7 569 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms