RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 DEPTORQ8TB45 409 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 TBC1D16Q8TBP0 767 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 WBP2Q969T9 261 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 MYD88Q99836 296 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 KATNAL1Q9BW62 490 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 NPFFR1Q9GZQ6 430 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 ACAD9Q9H845 621 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 UPB1Q9UBR1 384 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 KLQ9UEF7 1012 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 BAG5Q9UL15 447 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 PHTF1Q9UMS5 762 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 C19orf53Q9UNZ5 99 aaPredicted RBP3□□□□□ -1.93
HMGB1P18-201ENST00000438801 NFS1Q9Y697 457 aa3□□□□□ -1.93
HMGB1P18-201ENST00000438801 MAGEA13PA6NCF6 341 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 PRAC2D3DTV9 90 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 HNRNPRO43390 633 aaKnown RBP2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 AFPP02771 609 aaKnown RBP2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 ITGA2BP08514 1039 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 NBPF7P0C2Y1 421 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 CYP4B1P13584 511 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 AMD1P17707 334 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 TECP42680 631 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 RPS6KA3P51812 740 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 ADORA2A-AS1P86434 159 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 ARL16Q0P5N6 197 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 DLG1Q12959 904 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 DCTN1Q14203 1278 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 PTK2BQ14289 1009 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 XKR9Q5GH70 373 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 CEP85LQ5SZL2 805 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 TTC22Q5TAA0 569 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 TBC1D9BQ66K14 1250 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 NCAPH2Q6IBW4 605 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 RHBDF2Q6PJF5 856 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 KSR2Q6VAB6 950 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 RAB11FIP2Q7L804 512 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 NAGSQ8N159 534 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 LMNTD1Q8N9Z9 388 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 GPT2Q8TD30 523 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 CPT1BQ92523 772 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 BICD1Q96G01 975 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 TMEM41AQ96HV5 264 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 TNIP3Q96KP6 325 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 SGCZQ96LD1 299 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 CLPBQ9H078 707 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 ELAC1Q9H777 363 aaKnown RBP2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 CLK4Q9HAZ1 481 aaKnown RBP2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 IL17BQ9UHF5 180 aa2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 CPSF1Q10570 1443 aaKnown RBP2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 POLR3AO14802 1390 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P18-201ENST00000438801 ADGRF5Q8IZF2 1346 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 ICE1Q9Y2F5 2266 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 LAMA1P25391 3075 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 TARSL2A2RTX5 802 aaKnown RBP2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 LGALS16A8MUM7 142 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 TULP2O00295 520 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 CLGNO14967 610 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 ACTL6BO94805 426 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 CYP21A2P08686 494 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 SERPINA4P29622 427 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 NF2P35240 595 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 SKIV2L2P42285 1042 aaKnown RBP2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 AP2B1P63010 937 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 CYP4A11Q02928 519 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 CXCL9Q07325 125 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 TROAPQ12815 778 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 HDAC1Q13547 482 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 STPG1Q5TH74 334 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 RINLQ6ZS11 566 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 C9orf139Q6ZV77 190 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 SMIM29Q86T20 159 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 SLC44A2Q8IWA5 706 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 DCUN1D3Q8IWE4 304 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 BRSK2Q8IWQ3 736 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 PGBD5Q8N414 524 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 ANKRD44Q8N8A2 993 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 PTGR2Q8N8N7 351 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 EID2BQ96D98 161 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 SCMH1Q96GD3 660 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 MSTO1Q9BUK6 570 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 ABHD16BQ9H3Z7 469 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 OBP2BQ9NPH6 170 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 GRHL1Q9NZI5 618 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 HERC5Q9UII4 1024 aaKnown RBP2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 DHDHQ9UQ10 334 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 TSC2P49815 1807 aa2.98□□□□□ -1.93
HMGB1P18-201ENST00000438801 APC2O95996 2303 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 NOTCH3Q9UM47 2321 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 FANCMQ8IYD8 2048 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 A0A096LPK6 155 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 LOC105371045A0A1W2PR82 267 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 NPIPB11E5RHQ5 1161 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 CHL1O00533 1208 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 TIMM23O14925 209 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 FFAR2O15552 330 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 XPNPEP2O43895 674 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 PARNO95453 639 aaKnown RBP2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 CH25HO95992 272 aa2.97□□□□□ -1.93
HMGB1P18-201ENST00000438801 CHN1P15882 459 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms