RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PRSS38A1L453 326 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 GOLGA6L9A6NEM1 432 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 NRDCO43847 1150 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 PMPCBO75439 489 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 NDST3O95803 873 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 NFKB1P19838 968 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 CD68P34810 354 aaPredicted RBP24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 HES3Q5TGS1 186 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 KDELC2Q7Z4H8 507 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 ZNF567Q8N184 647 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 SCAMP4Q969E2 229 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 FCRL5Q96RD9 977 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 ZFYVE1Q9HBF4 777 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 MAGEE1Q9HCI5 957 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 CYP4F12Q9HCS2 524 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 MRPL40Q9NQ50 206 aaKnown RBP24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 U3KQA8 63 aa24.65■■□□□ 1.54
RAPGEF1-206ENST00000438647 KNTC1P50748 2209 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 FTCDO95954 541 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 CELA2BP08218 269 aaPredicted RBP24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 SPINT3P49223 89 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 CDKN3Q16667 212 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 FAM182AQ5T1J6 154 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 RFLNAQ6ZTI6 216 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 ARL10Q8N8L6 244 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 IFI44Q8TCB0 444 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 NAT6Q93015 286 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 HERPUD2Q9BSE4 406 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 FRMD8Q9BZ67 464 aaPredicted RBP24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 UBP1Q9NZI7 540 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 CAPN6Q9Y6Q1 641 aa24.64■■□□□ 1.54
RAPGEF1-206ENST00000438647 LRP4O75096 1905 aa24.64■■□□□ 1.53
RAPGEF1-206ENST00000438647 EME2A4GXA9 379 aaPredicted RBP24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 FAM149AA5PLN7 773 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 STK10O94804 968 aaKnown RBP24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 SOD1P00441 154 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 EPOP01588 193 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 RBP3P10745 1247 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 RBL1P28749 1068 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 EIF3EP60228 445 aaKnown RBP24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 ST3GAL2Q16842 350 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 KCTD16Q68DU8 428 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 ITPRIPL1Q6GPH6 555 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 LYSMD3Q7Z3D4 306 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 SLC35F3Q8IY50 421 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 CACTIN-AS1Q8N1I8 211 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 KDF1Q8NAX2 398 aaPredicted RBP24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 TTC13Q8NBP0 860 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 RIOK2Q9BVS4 552 aaKnown RBP24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 CDH19Q9H159 772 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 ABCG4Q9H172 646 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 FAM83DQ9H4H8 585 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 CARS2Q9HA77 564 aaKnown RBP24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 RAD18Q9NS91 495 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 RSPH14Q9UHP6 348 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 GUCA1BQ9UMX6 200 aa24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 PACSIN2Q9UNF0 486 aaPredicted RBP24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 MAP1BP46821 2468 aaKnown RBP24.63■■□□□ 1.53
RAPGEF1-206ENST00000438647 AKAP13Q12802 2813 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 CEACAM5P06731 702 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 MYF5P13349 255 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 WNT3AP56704 352 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 INSM1Q01101 510 aaPredicted RBP24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 MPP3Q13368 585 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 TCEA2Q15560 299 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 NYAP1Q6ZVC0 841 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 EFL1Q7Z2Z2 1120 aaKnown RBP24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 TAF8Q7Z7C8 310 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 HES6Q96HZ4 224 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 HIC2Q96JB3 615 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 GPR63Q9BZJ6 419 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 TMEM168Q9H0V1 697 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 TRNAU1APQ9NX07 287 aaKnown RBP24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 GPR34Q9UPC5 381 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 CLCA2Q9UQC9 943 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 SLC17A4Q9Y2C5 497 aa24.62■■□□□ 1.53
RAPGEF1-206ENST00000438647 PLXNB3Q9ULL4 1909 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 CPED1A4D0V7 1026 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 DDX3YO15523 660 aaKnown RBP24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 OPA1O60313 960 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 IVLP07476 585 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 CCDC175P0C221 793 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 HENMT1Q5T8I9 393 aaKnown RBP24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 AADACL2Q6P093 401 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 GUSBP11Q6P575 273 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 DARS2Q6PI48 645 aaKnown RBP24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 KDELC1Q6UW63 502 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 LRRC8AQ8IWT6 810 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 PDCD7Q8N8D1 485 aaKnown RBP24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 GBA3Q9H227 469 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 GULP1Q9UBP9 304 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 PADI4Q9UM07 663 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 SHOC2Q9UQ13 582 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 ZNF711Q9Y462 761 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 EPG5Q9HCE0 2579 aa24.61■■□□□ 1.53
RAPGEF1-206ENST00000438647 WDFY3Q8IZQ1 3526 aa24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 LOC285095A0A1B0GVY8 99 aa24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 PIRTP0C851 137 aa24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 ILF3Q12906 894 aaKnown RBP eCLIP24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 PEX6Q13608 980 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms