RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 PCYOX1Q9UHG3 505 aa16.1■□□□□ 0.17
SNRPB-202ENST00000438552 DNAH14Q0VDD8 3507 aa16.1■□□□□ 0.17
SNRPB-202ENST00000438552 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.09■□□□□ 0.17
SNRPB-202ENST00000438552 SPTY2D1-AS1A0A0U1RR47 76 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 TCRBV7S3A2A0A539 114 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 C4orf47A7E2U8 309 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 CCDC188H7C350 402 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 URI1O94763 535 aaPredicted RBP16.09■□□□□ 0.17
SNRPB-202ENST00000438552 HMGCLP35914 325 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 PTGIRP43119 386 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 GPR1P46091 355 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 DCDC1P59894 354 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 YPEL5P62699 121 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 DPTQ07507 201 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 C2orf54Q08AI8 447 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 SEPT6Q14141 434 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 KCNJ11Q14654 390 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 PTPRCAPQ14761 206 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 POU6F1Q14863 301 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 NFATC4Q14934 902 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 PPP1R7Q15435 360 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 UAP1L1Q3KQV9 507 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 ZNF542PQ5EBM4 170 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 MACC1Q6ZN28 852 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 LINC00523Q86TU6 105 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 PARGQ86W56 976 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 DCP2Q8IU60 420 aaKnown RBP16.09■□□□□ 0.17
SNRPB-202ENST00000438552 RAVER1Q8IY67 606 aaKnown RBP16.09■□□□□ 0.17
SNRPB-202ENST00000438552 DNAAF3Q8N9W5 541 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 LGR4Q9BXB1 951 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 FAM83DQ9H4H8 585 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.09■□□□□ 0.171e-6■□□□□ 9.2
SNRPB-202ENST00000438552 IL17CQ9P0M4 197 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 FEZ2Q9UHY8 353 aaPredicted RBP16.09■□□□□ 0.17
SNRPB-202ENST00000438552 PNMA8BQ9ULN7 279 aaPredicted RBP16.09■□□□□ 0.17
SNRPB-202ENST00000438552 KCTD3Q9Y597 815 aa16.09■□□□□ 0.17
SNRPB-202ENST00000438552 PTPRZ1P23471 2315 aaPredicted RBP16.08■□□□□ 0.17
SNRPB-202ENST00000438552 RGSL1A5PLK6 1076 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 FADS2P1A8MWK0 482 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 TOR1BO14657 336 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 TRIM23P36406 574 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 CCT8P50990 548 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 KIAA1024LP59773 190 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 CDK3Q00526 305 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 CDH17Q12864 832 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 EIF2B5Q13144 721 aaKnown RBP16.08■□□□□ 0.16
SNRPB-202ENST00000438552 PTK6Q13882 451 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 SHBQ15464 509 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 TAF1AQ15573 450 aaPredicted RBP16.08■□□□□ 0.16
SNRPB-202ENST00000438552 ANKRD22Q5VYY1 191 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 KCTD16Q68DU8 428 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 ADAMTSL4Q6UY14 1074 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 TRIM74Q86UV6 250 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 OXR1Q8N573 874 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 NETO1Q8TDF5 533 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 SLCO2A1Q92959 643 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 KRT12Q99456 494 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 TEX101Q9BY14 249 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 ERVMER34-1Q9H9K5 563 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 CASS4Q9NQ75 786 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 DNAAF2Q9NVR5 837 aaKnown RBP16.08■□□□□ 0.16
SNRPB-202ENST00000438552 DNAJC28Q9NX36 388 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 NFKBIL1Q9UBC1 381 aaPredicted RBP16.08■□□□□ 0.16
SNRPB-202ENST00000438552 ASIC3Q9UHC3 531 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 PKP3Q9Y446 797 aa16.08■□□□□ 0.16
SNRPB-202ENST00000438552 ASCC3Q8N3C0 2202 aaKnown RBP16.07■□□□□ 0.16
SNRPB-202ENST00000438552 A0A1B0GTQ1 180 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 CCDC78A2IDD5 438 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 TMEM202A6NGA9 273 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 KIF2AO00139 706 aaPredicted RBP16.07■□□□□ 0.16
SNRPB-202ENST00000438552 CACNB4O00305 520 aaPredicted RBP16.07■□□□□ 0.16
SNRPB-202ENST00000438552 INPP4BO15327 924 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 STX7O15400 261 aaKnown RBP16.07■□□□□ 0.16
SNRPB-202ENST00000438552 SDC3O75056 442 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 TMEM63AO94886 807 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 CRTAMO95727 393 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 MYCLP1P12525 358 aaPredicted RBP16.07■□□□□ 0.16
SNRPB-202ENST00000438552 TPSB2P20231 275 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 LPOP22079 712 aaPredicted RBP16.07■□□□□ 0.16
SNRPB-202ENST00000438552 TEAD1P28347 426 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 EPHA8P29322 1005 aaPredicted RBP16.07■□□□□ 0.16
SNRPB-202ENST00000438552 ARRB1P49407 418 aaPredicted RBP16.07■□□□□ 0.16
SNRPB-202ENST00000438552 ZNF140P52738 457 aaPredicted RBP16.07■□□□□ 0.16
SNRPB-202ENST00000438552 LIMK1P53667 647 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 ARHGAP8P85298 464 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 DR1Q01658 176 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 PTK2BQ14289 1009 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 TPSAB1Q15661 275 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 CERCAMQ5T4B2 595 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 FAM151BQ6UXP7 276 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 ZNF534Q76KX8 674 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 JAMLQ86YT9 394 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 RBFAQ8N0V3 343 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 SPATA4Q8NEY3 305 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 OR4K2Q8NGD2 314 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 OR13C4Q8NGS5 318 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 BRSK1Q8TDC3 778 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 CPT1BQ92523 772 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 PDXPQ96GD0 296 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 WDR92Q96MX6 357 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms