RNA–Protein interactions for RNA: ENST00000437048.6

VPS53-204, Transcript of VPS53, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS53, Length 13,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-204ENST00000437048 SDR16C5Q8N3Y7 309 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 OR5J2Q8NH18 312 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 UFD1Q92890 307 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 RIIAD1A6NNX1 92 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 NOTOA8MTQ0 251 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 FGBP02675 491 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 ACO1P21399 889 aaKnown RBP7.18□□□□□ -1.26
VPS53-204ENST00000437048 IL18Q14116 193 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 HMGN3Q15651 99 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 FAM196AQ6ZSG2 479 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 MTSS1LQ765P7 747 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 SP8Q8IXZ3 490 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 USP7Q93009 1102 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 SPATA33Q96N06 139 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 ZNF285Q96NJ3 590 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 INPP4AQ96PE3 977 aaPredicted RBP7.18□□□□□ -1.26
VPS53-204ENST00000437048 SLC4A5Q9BY07 1137 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 BTG4Q9NY30 223 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 ZNF99A8MXY4 864 aaPredicted RBP7.18□□□□□ -1.26
VPS53-204ENST00000437048 FSCN2O14926 492 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 CCNT2O60583 730 aaKnown RBP7.18□□□□□ -1.26
VPS53-204ENST00000437048 MAP3K6O95382 1288 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 NFICP08651 508 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 CYP3A4P08684 503 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 CYP2F1P24903 491 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 SERPINA4P29622 427 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 CPT1AP50416 773 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 ADGRE1Q14246 886 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 ZNF234Q14588 700 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 PTCHD4Q6ZW05 846 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 SLC44A1Q8WWI5 657 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 TM9SF2Q99805 663 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 ATP13A1Q9HD20 1204 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 ZMYM5Q9UJ78 669 aa7.18□□□□□ -1.26
VPS53-204ENST00000437048 LRRC14BA6NHZ5 514 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 IL32P24001 234 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 DPYSL3Q14195 570 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 ASB18Q6ZVZ8 466 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 ASB15Q8WXK1 588 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 GIMAP5Q96F15 307 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 HYLS1Q96M11 299 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 RAMP2O60895 175 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 OAZ2O95190 189 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 HOXD8P13378 290 aaPredicted RBP7.17□□□□□ -1.26
VPS53-204ENST00000437048 SLC2A4P14672 509 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 COQ5Q5HYK3 327 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 RAB41Q5JT25 222 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 GPR158Q5T848 1215 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 CMTR2Q8IYT2 770 aaKnown RBP7.17□□□□□ -1.26
VPS53-204ENST00000437048 RBFAQ8N0V3 343 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 SIX5Q8N196 739 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 SMARCD1Q96GM5 515 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 TMEM176AQ96HP8 235 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 HGH1Q9BTY7 390 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 POTEKPQ9BYX7 375 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 PRDM5Q9NQX1 630 aaPredicted RBP7.17□□□□□ -1.26
VPS53-204ENST00000437048 ZNF510Q9Y2H8 683 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 POLR1DQ9Y2S0 133 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 KIF28PB7ZC32 967 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 AZIN1O14977 448 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 GJA9P57773 515 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 SULT2A1Q06520 285 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 DGCR6Q14129 220 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 C10orf53Q8N6V4 93 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 GALNT6Q8NCL4 622 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 SLC7A6OSQ96CW6 309 aaPredicted RBP7.17□□□□□ -1.26
VPS53-204ENST00000437048 MARK4Q96L34 752 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 HNRNPABQ99729 332 aaKnown RBP7.17□□□□□ -1.26
VPS53-204ENST00000437048 CRISPLD1Q9H336 500 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 KCNQ5Q9NR82 932 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 NARFQ9UHQ1 456 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 ENTPD6O75354 484 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 ANXA3P12429 323 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 S100PP25815 95 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 KCNJ1P48048 391 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 SREBF2Q12772 1141 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 SLC22A10Q63ZE4 541 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 SLC44A5Q8NCS7 719 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 KCNN1Q92952 543 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 CRAMP1Q96RY5 1269 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 FAM129BQ96TA1 746 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 UCK2Q9BZX2 261 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 SCP2D1Q9UJQ7 156 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 PCDHB12Q9Y5F1 795 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 ADAMTS13Q76LX8 1427 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 SLC19A2O60779 497 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 PMPCBO75439 489 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 GNAO1P09471 354 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 OR2B6P58173 313 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 SRP54P61011 504 aaKnown RBP7.17□□□□□ -1.26
VPS53-204ENST00000437048 NFE2L1Q14494 772 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 ZYG11AQ6WRX3 759 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 PRCCQ92733 491 aaPredicted RBP7.17□□□□□ -1.26
VPS53-204ENST00000437048 SALL1Q9NSC2 1324 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 IFNA21P01568 189 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 KIR3DL1P43629 444 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 KCNJ2P63252 427 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 ULK3Q6PHR2 472 aa7.17□□□□□ -1.26
VPS53-204ENST00000437048 ADGRD1Q6QNK2 874 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms