RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 CTNNAL1Q9UBT7 734 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 SERGEFQ9UGK8 458 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 STK25O00506 426 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 ACADMP11310 421 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 GABRG2P18507 467 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 GP5P40197 560 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 LIG3P49916 1009 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 MRNIPQ6NTE8 343 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 PACS1Q6VY07 963 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 USP30Q70CQ3 517 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 HSD11B1LQ7Z5J1 315 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 OTUD6BQ8N6M0 293 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 C2CD4AQ8NCU7 369 aaPredicted RBP22.94■■□□□ 1.26
CPSF4-204ENST00000436336 GPR26Q8NDV2 337 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 CLDN23Q96B33 292 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 PGM2Q96G03 612 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 TBK1Q9UHD2 729 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 FZD4Q9ULV1 537 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 PSAT1Q9Y617 370 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 SLC30A1Q9Y6M5 507 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 GLYATL1P3A0A0U1RQE8 302 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 RGS16O15492 202 aaPredicted RBP22.94■■□□□ 1.26
CPSF4-204ENST00000436336 TSPAN6O43657 245 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 SYF2O95926 243 aaKnown RBP22.94■■□□□ 1.26
CPSF4-204ENST00000436336 OGNP20774 298 aaKnown RBP22.94■■□□□ 1.26
CPSF4-204ENST00000436336 FOXN2P32314 431 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 SLC1A2P43004 574 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 SERPINB9P50453 376 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 TAS2R38P59533 333 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 CTBP1Q13363 440 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 GRTP1Q5TC63 336 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 MICALCLQ6ZW33 695 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 STRA8Q7Z7C7 330 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 CILP2Q8IUL8 1156 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 DENND6AQ8IWF6 608 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 CNPY4Q8N129 248 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 FLCNQ8NFG4 579 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 CXorf40AQ8TE69 158 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 GANCQ8TET4 914 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 SCG3Q8WXD2 468 aaKnown RBP22.94■■□□□ 1.26
CPSF4-204ENST00000436336 NECAB3Q96P71 396 aaPredicted RBP22.94■■□□□ 1.26
CPSF4-204ENST00000436336 WRAP53Q9BUR4 548 aaKnown RBP22.94■■□□□ 1.26
CPSF4-204ENST00000436336 CDH19Q9H159 772 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 CENPHQ9H3R5 247 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 IL26Q9NPH9 171 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 MED4Q9NPJ6 270 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 NFKBIL1Q9UBC1 381 aaPredicted RBP22.94■■□□□ 1.26
CPSF4-204ENST00000436336 FBXO5Q9UKT4 447 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 NCKAP1Q9Y2A7 1128 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 FNDC3AQ9Y2H6 1198 aaKnown RBP22.94■■□□□ 1.26
CPSF4-204ENST00000436336 BPTFQ12830 3046 aa22.94■■□□□ 1.26
CPSF4-204ENST00000436336 TRPM6Q9BX84 2022 aa22.93■■□□□ 1.26
CPSF4-204ENST00000436336 FAM155BO75949 473 aa22.93■■□□□ 1.26
CPSF4-204ENST00000436336 SRP72O76094 671 aaKnown RBP22.93■■□□□ 1.26
CPSF4-204ENST00000436336 RPS9P46781 194 aaKnown RBP22.93■■□□□ 1.26
CPSF4-204ENST00000436336 CSE1LP55060 971 aaKnown RBP22.93■■□□□ 1.26
CPSF4-204ENST00000436336 DCDC1P59894 354 aa22.93■■□□□ 1.26
CPSF4-204ENST00000436336 HSP90B2PQ58FF3 399 aa22.93■■□□□ 1.26
CPSF4-204ENST00000436336 TJAP1Q5JTD0 557 aa22.93■■□□□ 1.26
CPSF4-204ENST00000436336 LGSNQ5TDP6 509 aa22.93■■□□□ 1.26
CPSF4-204ENST00000436336 KIAA1324Q6UXG2 1013 aaKnown RBP22.93■■□□□ 1.26
CPSF4-204ENST00000436336 FAM151BQ6UXP7 276 aa22.93■■□□□ 1.26
CPSF4-204ENST00000436336 TECPR1Q7Z6L1 1165 aa22.93■■□□□ 1.26
CPSF4-204ENST00000436336 GALNT7Q86SF2 657 aa22.93■■□□□ 1.26
CPSF4-204ENST00000436336 SDCCAG8Q86SQ7 713 aaPredicted RBP22.93■■□□□ 1.26
CPSF4-204ENST00000436336 CHRDQ9H2X0 955 aa22.93■■□□□ 1.26
CPSF4-204ENST00000436336 MARCH4Q9P2E8 410 aaPredicted RBP22.93■■□□□ 1.26
CPSF4-204ENST00000436336 IQANK1A0A1B0GTG1 560 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 GAPDHSO14556 408 aaPredicted RBP22.92■■□□□ 1.26
CPSF4-204ENST00000436336 PLRG1O43660 514 aaKnown RBP22.92■■□□□ 1.26
CPSF4-204ENST00000436336 PRAMEF1O95521 474 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 CNTFP26441 200 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 CACNG1Q06432 222 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 ACOX1Q15067 660 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 TMED2Q15363 201 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 ZRANB3Q5FWF4 1079 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 TAOK1Q7L7X3 1001 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 NRSN1Q8IZ57 195 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 DTX3LQ8TDB6 740 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 COQ10AQ96MF6 247 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 RBBP8Q99708 897 aa22.92■■□□□ 1.26
CPSF4-204ENST00000436336 KRT38O76015 456 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 C6P13671 934 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 ETV3P41162 512 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 LEPRP48357 1165 aaKnown RBP22.91■■□□□ 1.26
CPSF4-204ENST00000436336 CREB5Q02930 508 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 SIGLEC14Q08ET2 396 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 AARS2Q5JTZ9 985 aaKnown RBP22.91■■□□□ 1.26
CPSF4-204ENST00000436336 AGBL2Q5U5Z8 902 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 RFLNAQ6ZTI6 216 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 Q6ZVL8 140 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 CYP2U1Q7Z449 544 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 SNX20Q7Z614 316 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 HMGB4Q8WW32 186 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 MCMBPQ9BTE3 642 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 STMN4Q9H169 189 aaPredicted RBP22.91■■□□□ 1.26
CPSF4-204ENST00000436336 FAM83DQ9H4H8 585 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 BCCIPQ9P287 314 aaKnown RBP eCLIP22.91■■□□□ 1.26
CPSF4-204ENST00000436336 SIT1Q9Y3P8 196 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 TRIOO75962 3097 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms