RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 WSCD2Q2TBF2 565 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 CCDC38Q502W7 563 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 ESRP1Q6NXG1 681 aaKnown RBP16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 TRAM1L1Q8N609 369 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 MFSD2AQ8NA29 543 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 DTX3LQ8TDB6 740 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 SEC14L1Q92503 715 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 CENPTQ96BT3 561 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 STAMBPL1Q96FJ0 436 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 KLHDC7BQ96G42 594 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 MYOCQ99972 504 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 RIOK2Q9BVS4 552 aaKnown RBP16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 PHACTR1Q9C0D0 580 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 ABCG8Q9H221 673 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 WDR26Q9H7D7 661 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 PHPT1Q9NRX4 125 aaPredicted RBP16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 NLE1Q9NVX2 485 aaPredicted RBP16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 SYBUQ9NX95 663 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 SOX13Q9UN79 622 aa16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 FNDC3AQ9Y2H6 1198 aaKnown RBP16.48■□□□□ 0.23
CTDSPL-204ENST00000435525 FAM237BA0A1B0GVD1 139 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 MROH6A6NGR9 719 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 C10orf142B7Z368 130 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 BUD23O43709 281 aaKnown RBP16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 AVILO75366 819 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 EPN2O95208 641 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 LMNAP02545 664 aaKnown RBP16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 RETP07949 1114 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 BPIP17213 487 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 PGAM1P18669 254 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 ITGALP20701 1170 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 MCM3P25205 808 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 MAOBP27338 520 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 MAGEA3P43357 314 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 ZNF140P52738 457 aaPredicted RBP16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 THOP1P52888 689 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 MSLNQ13421 630 aaPredicted RBP16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 PTK2BQ14289 1009 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 FGL2Q14314 439 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 ALS2CLQ60I27 953 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 PNCKQ6P2M8 343 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 KYAT3Q6YP21 454 aaKnown RBP16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 ZNF534Q76KX8 674 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 PTAR1Q7Z6K3 402 aaPredicted RBP16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 TP53I13Q8NBR0 393 aaPredicted RBP16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 KIFC1Q9BW19 673 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 TM9SF3Q9HD45 589 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 FZD3Q9NPG1 666 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 GRHL1Q9NZI5 618 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 NCDNQ9UBB6 729 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 DMGDHQ9UI17 866 aaKnown RBP16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 CD84Q9UIB8 345 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 PILRBQ9UKJ0 227 aa16.47■□□□□ 0.23
CTDSPL-204ENST00000435525 A0A0U1RQS6 177 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 ESYT3A0FGR9 886 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 PFDN6O15212 129 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 CRADDP78560 199 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 TMPRSS15P98073 1019 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 PDIA2Q13087 525 aaKnown RBP16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 INPP5AQ14642 412 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 AARS2Q5JTZ9 985 aaKnown RBP16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 HENMT1Q5T8I9 393 aaKnown RBP16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 AFTPHQ6ULP2 937 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 FAM151BQ6UXP7 276 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 ADAMTSL4Q6UY14 1074 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 CCDC25Q86WR0 208 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 TMEM145Q8NBT3 493 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 GPR26Q8NDV2 337 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 OR6P1Q8NGX9 317 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 FBXO25Q8TCJ0 367 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 SCAMP4Q969E2 229 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 ULK4Q96C45 1275 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 DNAJC1Q96KC8 554 aaKnown RBP16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 SLC6A18Q96N87 628 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 KLF6Q99612 283 aaPredicted RBP16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 EBNA1BP2Q99848 306 aaKnown RBP16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 HINFPQ9BQA5 517 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 NUSAP1Q9BXS6 441 aaKnown RBP16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 ZCCHC2Q9C0B9 1178 aaKnown RBP16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 CHRAC1Q9NRG0 131 aa16.46■□□□□ 0.23
CTDSPL-204ENST00000435525 H7C0S8 307 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 PRAMEF1O95521 474 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 CFIP05156 583 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 TUBBP07437 444 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 HOXC4P09017 264 aaPredicted RBP16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 IGFALSP35858 605 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 MPLP40238 635 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 CLDN2P57739 230 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 DHX9Q08211 1270 aaKnown RBP16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 GPR33Q49SQ1 333 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 FNBP1LQ5T0N5 605 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 ABI3BPQ7Z7G0 1075 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 PHYKPLQ8IUZ5 450 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 OR13C4Q8NGS5 318 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 GDAP1Q8TB36 358 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 ZNF398Q8TD17 642 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 PYROXD1Q8WU10 500 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 EID2BQ96D98 161 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 CDKN2AIPNLQ96HQ2 116 aa16.45■□□□□ 0.22
CTDSPL-204ENST00000435525 HIC2Q96JB3 615 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms