RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 ZNF224Q9NZL3 707 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 RPS6KA6Q9UK32 745 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 RAB23Q9ULC3 237 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 PCDHB12Q9Y5F1 795 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 ACTL7AQ9Y615 435 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 A0A1B0GTW7 788 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 CCDC78A2IDD5 438 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 A8MVJ9 347 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 BRINP1O60477 761 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 PPM1BO75688 479 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 LYPLA2O95372 231 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 NDUFB10O96000 172 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 PSMD4P55036 377 aaKnown RBP7.33□□□□□ -1.24
GARNL3-205ENST00000435213 CYP24A1Q07973 514 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 MGAT3Q09327 533 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 DDR2Q16832 855 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 SUPT20HL1Q3ZLR7 823 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 C16orf54Q6UWD8 224 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 MFSD7Q6UXD7 560 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 PRPF39Q86UA1 669 aaKnown RBP7.33□□□□□ -1.24
GARNL3-205ENST00000435213 RHPN2Q8IUC4 686 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 MAP4K3Q8IVH8 894 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 TP53I13Q8NBR0 393 aaPredicted RBP7.33□□□□□ -1.24
GARNL3-205ENST00000435213 SLC37A3Q8NCC5 494 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 CPT1BQ92523 772 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 SMG7Q92540 1137 aaKnown RBP7.33□□□□□ -1.24
GARNL3-205ENST00000435213 CCDC124Q96CT7 223 aaKnown RBP7.33□□□□□ -1.24
GARNL3-205ENST00000435213 SGTBQ96EQ0 304 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 TRMT2BQ96GJ1 504 aaKnown RBP7.33□□□□□ -1.24
GARNL3-205ENST00000435213 GTPBP2Q9BX10 602 aaKnown RBP7.33□□□□□ -1.24
GARNL3-205ENST00000435213 NXF1Q9UBU9 619 aaKnown RBP7.33□□□□□ -1.24
GARNL3-205ENST00000435213 ZMIZ1Q9ULJ6 1067 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 WDR81Q562E7 1941 aa7.33□□□□□ -1.24
GARNL3-205ENST00000435213 ASTN2O75129 1339 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ZNF780AO75290 641 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 BANF1O75531 89 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ALBP02768 609 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 SERPINA6P08185 405 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 HOXD4P09016 255 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ERP29P30040 261 aaKnown RBP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 SOX6P35712 828 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 DEFA1P59665 94 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 DEFA3P59666 94 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 GTF2IP78347 998 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 IFITM3Q01628 133 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 LDLRAP1Q5SW96 308 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 FNBP1LQ5T0N5 605 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 CDC42EP5Q6NZY7 148 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 HHIPL2Q6UWX4 724 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 CFAP77Q6ZQR2 320 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 SLC16A12Q6ZSM3 486 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 SV2AQ7L0J3 742 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 TAS1R3Q7RTX0 852 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ERMP1Q7Z2K6 904 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ZBTB33Q86T24 672 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 CLEC4FQ8N1N0 589 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 MCUQ8NE86 351 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 SLC7A14Q8TBB6 771 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 TRPM4Q8TD43 1214 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 WDR83Q9BRX9 315 aaKnown RBP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 EFCAB1Q9HAE3 211 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ALG13Q9NP73 1137 aaKnown RBP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 UFSP2Q9NUQ7 469 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 CD274Q9NZQ7 290 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 LRFN2Q9ULH4 789 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ACOT9Q9Y305 439 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 SF3B1O75533 1304 aaKnown RBP eCLIP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 LOC390937A0A1W2PQ73 354 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 FAM92AA1XBS5 289 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 LINC00862A6NCI5 91 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 C2orf71A6NGG8 1288 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ONECUT3O60422 494 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 HTR3BO95264 441 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 IL7P13232 177 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 AOC1P19801 751 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 SSTR3P32745 418 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 TRHRP34981 398 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 MASP1P48740 699 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 RARRES1P49788 294 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 PPP5CP53041 499 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 STX5Q13190 355 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 CBLBQ13191 982 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 PMS2P3Q13401 168 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 SMAD4Q13485 552 aaKnown RBP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ZACNQ401N2 412 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 DGKKQ5KSL6 1271 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ZBTB37Q5TC79 503 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 PLBD1Q6P4A8 553 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 UTS2BQ765I0 119 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 BTLAQ7Z6A9 289 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 SIAH1Q8IUQ4 282 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ABRAQ8N0Z2 381 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 OR8H2Q8N162 312 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 PDIK1LQ8N165 341 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ZNF786Q8N393 782 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 BEST2Q8NFU1 509 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 SERAC1Q96JX3 654 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ZNF285Q96NJ3 590 aa7.32□□□□□ -1.24
GARNL3-205ENST00000435213 KLF6Q99612 283 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-205ENST00000435213 ZPBPQ9BS86 351 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms