RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 MT-CO1P00395 513 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 COL6A1P12109 1028 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 RPL5P46777 297 aaKnown RBP16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 GPR17Q13304 367 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 EML3Q32P44 896 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 C6orf52Q5T4I8 152 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SATL1Q86VE3 508 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CHERPQ8IWX8 916 aaKnown RBP16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TWIST2Q8WVJ9 160 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 GPR62Q9BZJ7 368 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MAGEH1Q9H213 219 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TUBB1Q9H4B7 451 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CCSER2Q9H7U1 834 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MAP10Q9P2G4 905 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SLC27A5Q9Y2P5 690 aa16.04■□□□□ 0.16
HLA-DQB2-231ENST00000435145 A0A0D9SEW6 157 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 LCHNA4D1U4 455 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 LRRC14BA6NHZ5 514 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 H3BNC9 293 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PIP5K1BO14986 540 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MATN4O95460 622 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MRPL19P49406 292 aaKnown RBP16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SLC7A2P52569 658 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 FOXA1P55317 472 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SREBF2Q12772 1141 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 APOFQ13790 326 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 GK3PQ14409 553 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PFKFB4Q16877 469 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 RSPO2Q6UXX9 243 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 LGI2Q8N0V4 545 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PCYOX1LQ8NBM8 494 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 NSUN5Q96P11 429 aaKnown RBP16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 FAM193BQ96PV7 902 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PSKH2Q96QS6 385 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MRPS26Q9BYN8 205 aaKnown RBP16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MID1IP1Q9NPA3 183 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SDR39U1Q9NRG7 319 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TMEM161AQ9NX61 479 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SEPT3Q9UH03 358 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PADI4Q9UM07 663 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 LZTS1Q9Y250 596 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 NDUFAF1Q9Y375 327 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SPO11Q9Y5K1 396 aa16.03■□□□□ 0.16
HLA-DQB2-231ENST00000435145 A0A0J9YYE9 177 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 C7orf72A4D263 438 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TMEM88BA6NKF7 163 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 F5H5T6 163 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TLR5O60602 858 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PIRTP0C851 137 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 PRKAR2AP13861 404 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CR2P20023 1033 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SLC6A4P31645 630 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 KCNQ1P51787 676 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ACLYP53396 1101 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 GNA12Q03113 381 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SMARCB1Q12824 385 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 IKBKEQ14164 716 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 C11orf91Q3C1V1 193 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 GALNT4Q8N4A0 578 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 LRTOMTQ8WZ04 291 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 EXT2Q93063 718 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ZUFSPQ96AP4 578 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 ZFRQ96KR1 1074 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 CNBD2Q96M20 576 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TCF12Q99081 682 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 TTLL2Q9BWV7 592 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 C1QTNF3Q9BXJ4 246 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 SYTL2Q9HCH5 934 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 MARCH5Q9NX47 278 aa16.02■□□□□ 0.16
HLA-DQB2-231ENST00000435145 FXYD1O00168 92 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 CLASP2O75122 1294 aaKnown RBP16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 PGM3O95394 542 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 CLPTM1O96005 669 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 RPS17P08708 135 aaKnown RBP16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 FAM58BPP0C7Q3 252 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 TM4SF4P48230 202 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 ATP6V0D1P61421 351 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 TXNL4AP83876 142 aaKnown RBP16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 LCP2Q13094 533 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 GRB7Q14451 532 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 COQ5Q5HYK3 327 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 PRMT9Q6P2P2 845 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 AFTPHQ6ULP2 937 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 LAYNQ6UX15 382 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 RNF19BQ6ZMZ0 732 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 HERC6Q8IVU3 1022 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 RYBPQ8N488 228 aaPredicted RBP16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 MINDY1Q8N5J2 469 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 STAG3L4Q8TBR4 150 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 EME1Q96AY2 570 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 B3GALT6Q96L58 329 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 HOPXQ9BPY8 73 aaPredicted RBP16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 COQ10BQ9H8M1 238 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 SLC52A3Q9NQ40 469 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 ARMC1Q9NVT9 282 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 IKZF3Q9UKT9 509 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 PTGDR2Q9Y5Y4 395 aa16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 OAS3Q9Y6K5 1087 aaKnown RBP16.02■□□□□ 0.15
HLA-DQB2-231ENST00000435145 KLK8O60259 260 aa16.01■□□□□ 0.15
HLA-DQB2-231ENST00000435145 ACSL4O60488 711 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms