RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 GALK2Q01415 458 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CD47Q08722 323 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TNFAIP1Q13829 316 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 SKIV2LQ15477 1246 aaKnown RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 KDELC2Q7Z4H8 507 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 DENND6AQ8IWF6 608 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 PNPT1Q8TCS8 783 aaKnown RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 BHMTQ93088 406 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 P2RY11Q96G91 374 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 MASTLQ96GX5 879 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 RMDN3Q96TC7 470 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 ASPSCR1Q9BZE9 553 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 OSBPL2Q9H1P3 480 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 SMOC2Q9H3U7 446 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 RPAP3Q9H6T3 665 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TMPRSS4Q9NRS4 437 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 UCKL1Q9NWZ5 548 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 VWA7Q9Y334 891 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 U3KQV3 271 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 RGS13O14921 159 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 OGTO15294 1046 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 MED7O43513 233 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CD68P34810 354 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 MAGEA6P43360 314 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 KRT6CP48668 564 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 SYT16Q17RD7 645 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 OR13J1Q8NGT2 312 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CNIH3Q8TBE1 160 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TRIB2Q92519 343 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TDRD3Q9H7E2 651 aaKnown RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 VANGL2Q9ULK5 521 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 AQP12BA6NM10 295 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TTC34A8MYJ7 566 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 GNGT2O14610 69 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 SUPT7LO94864 414 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CAPN3P20807 821 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 GSK3BP49841 420 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 ARSFP54793 590 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 IL5RAQ01344 420 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 PTPN11Q06124 597 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 ATAD3CQ5T2N8 411 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 BTBD8Q5XKL5 378 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 DCAF15Q66K64 600 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 STRADAQ7RTN6 431 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TFAP2DQ7Z6R9 452 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 AQP12AQ8IXF9 295 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 NSUN6Q8TEA1 469 aaKnown RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CHURC1Q8WUH1 139 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TP53INP1Q96A56 240 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 VPS35Q96QK1 796 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CPNE5Q9HCH3 593 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CCDC177Q9NQR7 707 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 MRPL42Q9Y6G3 142 aaKnown RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 ZNF99A8MXY4 864 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CDK2AP1O14519 115 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 BNIP3LO60238 219 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 H2AFYO75367 372 aaKnown RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 ATG7O95352 703 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 JUNBP17275 347 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 FMO3P31513 532 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CYP2C18P33260 490 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 PIGAP37287 484 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CLCNKBP51801 687 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 DAB2P98082 770 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CTU2Q2VPK5 515 aaKnown RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 KIAA1841Q6NSI8 718 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 SHQ1Q6PI26 577 aaKnown RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CUZD1Q86UP6 607 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 FAM131BQ86XD5 332 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 LEMD2Q8NC56 503 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 RHOXF1Q8NHV9 184 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 FAR1Q8WVX9 515 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TMBIM1Q969X1 311 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 C3orf30Q96M34 536 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 GLIS2Q9BZE0 524 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 DBNDD1Q9H9R9 158 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 C14orf119Q9NWQ9 140 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TOR4AQ9NXH8 423 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 NARFQ9UHQ1 456 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 PCDHA10Q9Y5I2 948 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 PPEF1O14829 653 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TSPAN9O75954 239 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TRIM16O95361 564 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 FADS2O95864 444 aaKnown RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CLDN10P78369 228 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 PRKCEQ02156 737 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 NFYCQ13952 458 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 FBXO48Q5FWF7 155 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 ZNF667Q5HYK9 610 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CLEC14AQ86T13 490 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 CENPLQ8N0S6 344 aaPredicted RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 PMEPA1Q969W9 287 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 EGLN2Q96KS0 407 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 RHNO1Q9BSD3 238 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 IDI2Q9BXS1 227 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 FTHL17Q9BXU8 183 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 ENTPD7Q9NQZ7 604 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TRMT13Q9NUP7 481 aaKnown RBP7.45□□□□□ -1.22
CPSF6-202ENST00000435070 ERVK-18Q9QC07 812 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms