RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 C8orf82Q6P1X6 216 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 KIAA0408Q6ZU52 694 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 NLGN1Q8N2Q7 840 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 FBXO5Q9UKT4 447 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 ZNF214Q9UL59 606 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 KIAA1217Q5T5P2 1943 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 CCDC162PA2VCL2 907 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 FXYD1O00168 92 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 DFFAO00273 331 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 SNPHO15079 494 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 LRIG2O94898 1065 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 UGT2B4P06133 528 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 MBTD1Q05BQ5 628 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 BST2Q10589 180 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 LAPTM5Q13571 262 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 PCSK7Q16549 785 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 SLC25A52Q3SY17 297 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 PKN3Q6P5Z2 889 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 HACD2Q6Y1H2 254 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 CYHR1Q6ZMK1 362 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 STRADAQ7RTN6 431 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 ZDHHC17Q8IUH5 632 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 PSD4Q8NDX1 1056 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 ANKRD49Q8WVL7 239 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 C11orf84Q9BUA3 381 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 FICDQ9BVA6 458 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 TP63Q9H3D4 680 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 PIGVQ9NUD9 493 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 WDR70Q9NW82 654 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 AASSQ9UDR5 926 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 KLHL3Q9UH77 587 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 AKT3Q9Y243 479 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 BTAF1O14981 1849 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 TTC24A2A3L6 582 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 CCL22O00626 93 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 XPNPEP2O43895 674 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 TBC1D4O60343 1298 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 NDUFS2O75306 463 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 SEC24AO95486 1093 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 HSD17B1P14061 328 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 GSTM2P28161 218 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 ARL1P40616 181 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 BAG6P46379 1132 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 KCNC1P48547 511 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 COPZ1P61923 177 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 SKIV2LQ15477 1246 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 GPR158Q5T848 1215 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 PRAMEF18Q5VWM3 479 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 KCTD11Q693B1 232 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 PRMT9Q6P2P2 845 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 USP51Q70EK9 711 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 MINDY1Q8N5J2 469 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 POC5Q8NA72 575 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 OSCP1Q8WVF1 389 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 EFHD2Q96C19 240 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 ITCHQ96J02 903 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 IGSF5Q9NSI5 407 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 DNMT3BQ9UBC3 853 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 PCDHGA11Q9Y5H2 935 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 DNAJC15Q9Y5T4 150 aa11.53□□□□□ -0.56
HMGCS1-202ENST00000433297 ASNA1O43681 348 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 LTA4HP09960 611 aaKnown RBP11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 CHRNA4P43681 627 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 KCNK10P57789 538 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 SH3BP2P78314 561 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 TECRLQ5HYJ1 363 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 NOMO2Q5JPE7 1267 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 PCID2Q5JVF3 399 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 GLYATQ6IB77 296 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 SLC16A12Q6ZSM3 486 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 C14orf80Q86SX3 495 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 ABI1Q8IZP0 508 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 TTC30BQ8N4P2 665 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 ZNF555Q8NEP9 628 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 CNDP2Q96KP4 475 aaKnown RBP11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 NSMCE2Q96MF7 247 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 ZNF641Q96N77 438 aaPredicted RBP11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 CGREF1Q99674 301 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 MCMBPQ9BTE3 642 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 AKIP1Q9NQ31 210 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 GMIPQ9P107 970 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 VWA7Q9Y334 891 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 PCDHGA3Q9Y5H0 932 aa11.52□□□□□ -0.56
HMGCS1-202ENST00000433297 A0A087X1B8 175 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 BBIP1A8MTZ0 92 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 CLDN5O00501 218 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 UGT2B11O75310 529 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 VTNP04004 478 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 JUNBP17275 347 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 PRKACGP22612 351 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 DNAJB13P59910 316 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 DGUOKQ16854 277 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 ARL13BQ3SXY8 428 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 PAGE3Q5JUK9 113 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 C6orf141Q5SZD1 244 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 HFE2Q6ZVN8 426 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 CTU1Q7Z7A3 348 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 ZDHHC13Q8IUH4 622 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms