RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 FOXM1Q08050 763 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 GSTA3Q16772 222 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 FAM72AQ5TYM5 149 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 FAM72DQ6L9T8 149 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 DUS1LQ6P1R4 473 aaKnown RBP3.3□□□□□ -1.88
CLK1-204ENST00000432425 DSG4Q86SJ6 1040 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 FAM72BQ86X60 149 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 EXOC8Q8IYI6 725 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 ZNF34Q8IZ26 560 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 CSNK2A3Q8NEV1 391 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 MYRIPQ8NFW9 859 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 ABTB1Q969K4 478 aaPredicted RBP3.3□□□□□ -1.88
CLK1-204ENST00000432425 PKNOX2Q96KN3 472 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 SLC25A18Q9H1K4 315 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 FKRPQ9H9S5 495 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 MMP25Q9NPA2 562 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 ZFP57Q9NU63 452 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 TMEM30AQ9NV96 361 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 TAAR2Q9P1P5 351 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 ADAM18Q9Y3Q7 739 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 CEPT1Q9Y6K0 416 aa3.3□□□□□ -1.88
CLK1-204ENST00000432425 A0A0U1RQG5 324 aaPredicted RBP3.29□□□□□ -1.88
CLK1-204ENST00000432425 SNAP23O00161 211 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 DVL1O14640 695 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 FTCDO95954 541 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 EGFP01133 1207 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 MARK3P27448 753 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 TERF1P54274 439 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 DVL1P1P54792 670 aaPredicted RBP3.29□□□□□ -1.88
CLK1-204ENST00000432425 RBM39Q14498 530 aaKnown RBP3.29□□□□□ -1.88
CLK1-204ENST00000432425 DRAP1Q14919 205 aaPredicted RBP3.29□□□□□ -1.88
CLK1-204ENST00000432425 USP41Q3LFD5 358 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 C6orf141Q5SZD1 244 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 HIST2H2BCQ6DN03 193 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 HIST2H2BDQ6DRA6 164 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 ZNF449Q6P9G9 518 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 C19orf48Q6RUI8 117 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 PQLC2Q6ZP29 291 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 HAPLN4Q86UW8 402 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 C1orf87Q8N0U7 546 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 NFKBIDQ8NI38 313 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 ST8SIA4Q92187 359 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 ORAI1Q96D31 301 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 FBXO17Q96EF6 278 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 TMEM47Q9BQJ4 181 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 BRF2Q9HAW0 419 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 FBRSL1Q9HCM7 1045 aaKnown RBP3.29□□□□□ -1.88
CLK1-204ENST00000432425 SLC6A13Q9NSD5 602 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 SLC13A4Q9UKG4 626 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 ARHGAP26Q9UNA1 814 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 CAMK2AQ9UQM7 478 aa3.29□□□□□ -1.88
CLK1-204ENST00000432425 LRRFIP2Q9Y608 721 aaKnown RBP3.29□□□□□ -1.88
CLK1-204ENST00000432425 LILRA5A6NI73 299 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 SEC31AO94979 1220 aaKnown RBP3.28□□□□□ -1.88
CLK1-204ENST00000432425 F9P00740 461 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 CORO1AP31146 461 aaKnown RBP3.28□□□□□ -1.88
CLK1-204ENST00000432425 EIF3BP55884 814 aaKnown RBP3.28□□□□□ -1.88
CLK1-204ENST00000432425 EEF1A1P68104 462 aaKnown RBP3.28□□□□□ -1.88
CLK1-204ENST00000432425 PTP4A2Q12974 167 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 FGFBP1Q14512 234 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 MRGPRG-AS1Q2M3A8 158 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 PRICKLE4Q2TBC4 344 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 COL28A1Q2UY09 1125 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 SLC9C2Q5TAH2 1124 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 EEF1A1P5Q5VTE0 462 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 SIGIRRQ6IA17 410 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 MARK2Q7KZI7 788 aaKnown RBP3.28□□□□□ -1.88
CLK1-204ENST00000432425 GSTA5Q7RTV2 222 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 NFE4Q86UQ8 179 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 SMAP1Q8IYB5 467 aaPredicted RBP3.28□□□□□ -1.88
CLK1-204ENST00000432425 PCDH20Q8N6Y1 951 aaKnown RBP3.28□□□□□ -1.88
CLK1-204ENST00000432425 ZNF583Q96ND8 569 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 SYT17Q9BSW7 474 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 TRMT61BQ9BVS5 477 aaKnown RBP3.28□□□□□ -1.88
CLK1-204ENST00000432425 PRKRIP1Q9H875 184 aaPredicted RBP3.28□□□□□ -1.88
CLK1-204ENST00000432425 WASH6PQ9NQA3 447 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 ASAH2Q9NR71 780 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 TCF19Q9Y242 345 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 CYP46A1Q9Y6A2 500 aa3.28□□□□□ -1.88
CLK1-204ENST00000432425 A0A1W2PQM1 296 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 VCYO14598 125 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 TNFSF14O43557 240 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 WDR1O75083 606 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 MYOD1P15172 320 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 ABCD3P28288 659 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 GTF2H2Q13888 395 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 CCDC96Q2M329 555 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 PDSS1Q5T2R2 415 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 FRG2Q64ET8 278 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 ADAM5Q6NVV9 412 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 TTI2Q6NXR4 508 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 GTF2H2CQ6P1K8 395 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 KCTD8Q6ZWB6 473 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 CACNA2D4Q7Z3S7 1137 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 CIARTQ8N365 385 aaPredicted RBP3.27□□□□□ -1.89
CLK1-204ENST00000432425 ESX1Q8N693 406 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 GTF3C6Q969F1 213 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 PIGTQ969N2 578 aa3.27□□□□□ -1.89
CLK1-204ENST00000432425 HARBI1Q96MB7 349 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms