RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 NRROSQ86YC3 692 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 CCDC13Q8IYE1 715 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 TEX11Q8IYF3 940 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 SPATA6LQ8N4H0 392 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 AADATQ8N5Z0 425 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 SYT2Q8N9I0 419 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 ADAMTS14Q8WXS8 1223 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 DDB2Q92466 427 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 SAT2Q96F10 170 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 PGAP3Q96FM1 320 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 GCNAQ96QF7 691 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 PAFAH2Q99487 392 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 SH3GL2Q99962 352 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 TMEM79Q9BSE2 394 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 SYT17Q9BSW7 474 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 HAUS8Q9BT25 410 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 POLDIP3Q9BY77 421 aaKnown RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 PPIL3Q9H2H8 161 aaKnown RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZCCHC17Q9NP64 241 aaKnown RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 TRMT1Q9NXH9 659 aaKnown RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 PSD3Q9NYI0 1048 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 CRNNQ9UBG3 495 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 DNAJB4Q9UDY4 337 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZNF112Q9UJU3 913 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 CCL27Q9Y4X3 112 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZNF804BA4D1E1 1349 aa3.19□□□□□ -1.9
HMGB1P27-201ENST00000431429 TAF1P21675 1872 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 COL3A1P02461 1466 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 CEP164Q9UPV0 1460 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 LOC100509620A0A075B734 347 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 TMEM272A0A1B0GTI8 110 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 TCRBV21S2A2A0A5A6 115 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 CPED1A4D0V7 1026 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 A8MV72 311 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 MAP2K7O14733 419 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 SMAD9O15198 467 aaKnown RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 PLRG1O43660 514 aaKnown RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 FGBP02675 491 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 HIST1H2ABP04908 130 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 ICAM1P05362 532 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 CBSLP0DN79 551 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 CYP19A1P11511 503 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 PRF1P14222 555 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 MMP9P14780 707 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 ANXA7P20073 488 aaKnown RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 HIST1H2ADP20671 130 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 SAT1P21673 171 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 UBA1P22314 1058 aaKnown RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 HNRNPH1P31943 449 aaKnown RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 CBSP35520 551 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 FASLGP48023 281 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 STAT2P52630 851 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 RRP1P56182 461 aaKnown RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 ECT2LQ008S8 904 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 SREBF2Q12772 1141 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 AIMP1Q12904 312 aaKnown RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 LRMPQ12912 555 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 CTTNQ14247 550 aaKnown RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 MYBPC2Q14324 1141 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 HNF4GQ14541 408 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 CRY2Q49AN0 593 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZNF805Q5CZA5 627 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 DCAF12L2Q5VW00 463 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZNF626Q68DY1 528 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 METTL2BQ6P1Q9 378 aaKnown RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 HIST3H2AQ7L7L0 130 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 ZNF367Q7RTV3 350 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 ATG9AQ7Z3C6 839 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 CACNA2D4Q7Z3S7 1137 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 ADIPOR2Q86V24 386 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 EPHX4Q8IUS5 362 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 SCYL3Q8IZE3 742 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 AVL9Q8NBF6 648 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 POGLUT1Q8NBL1 392 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 TRIB2Q92519 343 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 ARSGQ96EG1 525 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 METTL2AQ96IZ6 378 aaKnown RBP3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 VCPIP1Q96JH7 1222 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 APOLD1Q96LR9 279 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 DGAT2Q96PD7 388 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 KIFC3Q9BVG8 833 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 EDEM3Q9BZQ6 932 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 OSGEPL1Q9H4B0 414 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 PPP1R3EQ9H7J1 279 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 PLAC1Q9HBJ0 212 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 SLC35C2Q9NQQ7 365 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 SH3GLB2Q9NR46 395 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 TMEM51Q9NW97 253 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 GDE1Q9NZC3 331 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 COPG2Q9UBF2 871 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 SQORQ9Y6N5 450 aa3.18□□□□□ -1.9
HMGB1P27-201ENST00000431429 GPR75-ASB3A0A0A6YYF3 556 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 IGHV4-28A0A0C4DH34 117 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 KANSL1LA0AUZ9 987 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 CLEC18AA5D8T8 446 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 TMEM8BA6NDV4 472 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 MS4A18H0YCH9 400 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 TIMM23O14925 209 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 HSPA12AO43301 675 aa3.17□□□□□ -1.9
HMGB1P27-201ENST00000431429 AVILO75366 819 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms