RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 CELA2BP08218 269 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-207ENST00000430858 PYGMP11217 842 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 MYF5P13349 255 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 CD68P34810 354 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-207ENST00000430858 TNNT3P45378 269 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-207ENST00000430858 ATP5OP48047 213 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 SPINT3P49223 89 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 INSM1Q01101 510 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-207ENST00000430858 CAMK2BQ13554 666 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 GALNT3Q14435 633 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 FAM182AQ5T1J6 154 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 KCTD16Q68DU8 428 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 GUSBP11Q6P575 273 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 RFLNAQ6ZTI6 216 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 NYAP1Q6ZVC0 841 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 KDELC2Q7Z4H8 507 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 SLC35F3Q8IY50 421 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 ZNF567Q8N184 647 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 PDCD7Q8N8D1 485 aaKnown RBP9.78□□□□□ -0.84
HDAC6-207ENST00000430858 SPATA22Q8NHS9 363 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 ACTL9Q8TC94 416 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 ZCCHC14Q8WYQ9 949 aaKnown RBP9.78□□□□□ -0.84
HDAC6-207ENST00000430858 SCAMP4Q969E2 229 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 FRMD8Q9BZ67 464 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-207ENST00000430858 CDH19Q9H159 772 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 ABCG4Q9H172 646 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 FAM83DQ9H4H8 585 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 CARS2Q9HA77 564 aaKnown RBP9.78□□□□□ -0.84
HDAC6-207ENST00000430858 ZFYVE1Q9HBF4 777 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 CYP4F12Q9HCS2 524 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 RAD18Q9NS91 495 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 GPR34Q9UPC5 381 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 CLCA2Q9UQC9 943 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 SLC17A4Q9Y2C5 497 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 ADGRG1Q9Y653 693 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 SPEGQ15772 3267 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 LRRK1Q38SD2 2015 aa9.78□□□□□ -0.84
HDAC6-207ENST00000430858 A0A0U1RQJ8 604 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 LOC285095A0A1B0GVY8 99 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 GOLGA6L9A6NEM1 432 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 KRT86O43790 486 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 OPA1O60313 960 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 PMPCBO75439 489 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 FTCDO95954 541 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 MT-CO3P00414 261 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 IVLP07476 585 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 RBP3P10745 1247 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 NFKB1P19838 968 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 RBL1P28749 1068 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 WNT3AP56704 352 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 DCDC1P59894 354 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 EIF3EP60228 445 aaKnown RBP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 OTUD4Q01804 1114 aaKnown RBP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 ILF3Q12906 894 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 TARDBPQ13148 414 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 MPP3Q13368 585 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 HENMT1Q5T8I9 393 aaKnown RBP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 ITPRIPL1Q6GPH6 555 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 EFL1Q7Z2Z2 1120 aaKnown RBP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 LYSMD3Q7Z3D4 306 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 TMC3Q7Z5M5 1100 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 TAF8Q7Z7C8 310 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 MARCH9Q86YJ5 346 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 CDKL3Q8IVW4 592 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 DCBLD1Q8N8Z6 715 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 TTC13Q8NBP0 860 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 OR6C4Q8NGE1 309 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 WDR48Q8TAF3 677 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 MAPK15Q8TD08 544 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 SCARF2Q96GP6 870 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 HIC2Q96JB3 615 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 WDR24Q96S15 920 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 HERPUD2Q9BSE4 406 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 RIOK2Q9BVS4 552 aaKnown RBP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 TMEM168Q9H0V1 697 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 CCDC86Q9H6F5 360 aaKnown RBP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 TRNAU1APQ9NX07 287 aaKnown RBP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 UBP1Q9NZI7 540 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 SIRPGQ9P1W8 387 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 GULP1Q9UBP9 304 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 DKK4Q9UBT3 224 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 RSPH14Q9UHP6 348 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 ZMIZ1Q9ULJ6 1067 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 PADI4Q9UM07 663 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 SUFUQ9UMX1 484 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 PACSIN2Q9UNF0 486 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-207ENST00000430858 ZNF711Q9Y462 761 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 CAPN6Q9Y6Q1 641 aa9.77□□□□□ -0.85
HDAC6-207ENST00000430858 TDRD6O60522 2096 aaKnown RBP9.76□□□□□ -0.85
HDAC6-207ENST00000430858 ACACBO00763 2458 aa9.76□□□□□ -0.85
HDAC6-207ENST00000430858 TRABD2BA6NFA1 517 aa9.76□□□□□ -0.85
HDAC6-207ENST00000430858 DDX3YO15523 660 aaKnown RBP9.76□□□□□ -0.85
HDAC6-207ENST00000430858 ANXA9O76027 345 aa9.76□□□□□ -0.85
HDAC6-207ENST00000430858 STK10O94804 968 aaKnown RBP9.76□□□□□ -0.85
HDAC6-207ENST00000430858 FUCA1P04066 466 aa9.76□□□□□ -0.85
HDAC6-207ENST00000430858 CAPNS1P04632 268 aa9.76□□□□□ -0.85
HDAC6-207ENST00000430858 PTMAP06454 111 aaKnown RBP9.76□□□□□ -0.85
HDAC6-207ENST00000430858 PIRTP0C851 137 aa9.76□□□□□ -0.85
HDAC6-207ENST00000430858 HLA-DPA1P20036 260 aa9.76□□□□□ -0.85
HDAC6-207ENST00000430858 GNPDA1P46926 289 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms