RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 SMAPO00193 183 aa13.3□□□□□ -0.28
CDK12-201ENST00000430627 EOMESO95936 686 aa13.3□□□□□ -0.28
CDK12-201ENST00000430627 RAB28P51157 221 aa13.3□□□□□ -0.28
CDK12-201ENST00000430627 TSNQ15631 228 aaKnown RBP13.3□□□□□ -0.28
CDK12-201ENST00000430627 NAB2Q15742 525 aa13.3□□□□□ -0.28
CDK12-201ENST00000430627 PTPRNQ16849 979 aa13.3□□□□□ -0.28
CDK12-201ENST00000430627 C9orf57Q5W0N0 161 aa13.3□□□□□ -0.28
CDK12-201ENST00000430627 PDPK2PQ6A1A2 396 aa13.3□□□□□ -0.28
CDK12-201ENST00000430627 SV2AQ7L0J3 742 aa13.3□□□□□ -0.28
CDK12-201ENST00000430627 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.3□□□□□ -0.28
CDK12-201ENST00000430627 ETNK1Q9HBU6 452 aa13.3□□□□□ -0.28
CDK12-201ENST00000430627 FAM170BA6NMN3 283 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 STX16-NPEPL1H3BU86 382 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 STX16O14662 325 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 NRP1O14786 923 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 KRT75O95678 551 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 ASLP04424 464 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 DLG2Q15700 870 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 TAPT1Q6NXT6 567 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 UBQLNLQ8IYU4 475 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 MSL3Q8N5Y2 521 aaKnown RBP13.29□□□□□ -0.28
CDK12-201ENST00000430627 TOR1AIP2Q8NFQ8 470 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 TOP1MTQ969P6 601 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 HHIPQ96QV1 700 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 IRF2BPLQ9H1B7 796 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 CDT1Q9H211 546 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 OSBPL3Q9H4L5 887 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 KLHL31Q9H511 634 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 FAM92AA1XBS5 289 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 KLHL41O60662 606 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 KCNH1O95259 989 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 C4BPBP20851 252 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 ABCG1P45844 678 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 LYSMD4Q5XG99 296 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 TMPPEQ6ZT21 453 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 ZNF720Q7Z2F6 126 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 TGM7Q96PF1 710 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 GFM1Q96RP9 751 aaKnown RBP13.29□□□□□ -0.28
CDK12-201ENST00000430627 TTYH1Q9H313 450 aaPredicted RBP13.29□□□□□ -0.28
CDK12-201ENST00000430627 FAM83DQ9H4H8 585 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 EPHB6O15197 1021 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 ZNF500O60304 480 aaPredicted RBP13.29□□□□□ -0.28
CDK12-201ENST00000430627 GJB6O95452 261 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 CRABP2P29373 138 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 CDH5P33151 784 aaPredicted RBP13.29□□□□□ -0.28
CDK12-201ENST00000430627 RARRES1P49788 294 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 ZNF542PQ5EBM4 170 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 RBFAQ8N0V3 343 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 OR8H2Q8N162 312 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 SNIP1Q8TAD8 396 aaKnown RBP13.29□□□□□ -0.28
CDK12-201ENST00000430627 ZSWIM3Q96MP5 696 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 PPP1R14DQ9NXH3 145 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 ACAD8Q9UKU7 415 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 GLI2P10070 1586 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 FAM86B1E9PN63 330 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 VEGFDO43915 354 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 FAM86B2P0C5J1 330 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 TMEM253P0C7T8 217 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 HLA-EP13747 358 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 TATDN1Q6P1N9 297 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 UNC93AQ86WB7 457 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 SNX33Q8WV41 574 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 TBCBQ99426 244 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 EPYCQ99645 322 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 TNPO3Q9Y5L0 923 aaKnown RBP13.29□□□□□ -0.28
CDK12-201ENST00000430627 WTIPA6NIX2 430 aaPredicted RBP13.29□□□□□ -0.28
CDK12-201ENST00000430627 ANKRD63C9JTQ0 380 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 CCRL2O00421 344 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 B4GALT2O60909 372 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 CSTBP04080 98 aaKnown RBP13.29□□□□□ -0.28
CDK12-201ENST00000430627 PGAM1P18669 254 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 GATMP50440 423 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 CPSF6Q16630 551 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDK12-201ENST00000430627 EEF1AKMT1Q8WVE0 214 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 GAL3ST3Q96A11 431 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 PDCD10Q9BUL8 212 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 SDHAF3Q9NRP4 125 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 IFT80Q9P2H3 777 aaPredicted RBP13.29□□□□□ -0.28
CDK12-201ENST00000430627 EFR3BQ9Y2G0 817 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 CFAP20Q9Y6A4 193 aaKnown RBP13.29□□□□□ -0.28
CDK12-201ENST00000430627 PIAS3Q9Y6X2 628 aa13.29□□□□□ -0.28
CDK12-201ENST00000430627 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 A0A075B6Q4 140 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 UBDO15205 165 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 ZNF185O15231 689 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 TP73O15350 636 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 ZNF823P16415 610 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 RCVRNP35243 200 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 SPAM1P38567 509 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 ZNF41P51814 821 aaPredicted RBP13.28□□□□□ -0.28
CDK12-201ENST00000430627 MGAT5Q09328 741 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 SPANXN3Q5MJ09 141 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 ULK3Q6PHR2 472 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 ZNF784Q8NCA9 323 aaPredicted RBP13.28□□□□□ -0.28
CDK12-201ENST00000430627 ACO2Q99798 780 aaKnown RBP13.28□□□□□ -0.28
CDK12-201ENST00000430627 MED31Q9Y3C7 131 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 PCDHGA12O60330 932 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 TLR1Q15399 786 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 MBLAC2Q68D91 279 aa13.28□□□□□ -0.28
CDK12-201ENST00000430627 EMBQ6PCB8 327 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms