RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 HOMEZQ8IX15 550 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 AQP12AQ8IXF9 295 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 ANKFN1Q8N957 763 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 SPATA22Q8NHS9 363 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 USP13Q92995 863 aaPredicted RBP8.71□□□□□ -1.02
GABPB1-205ENST00000429662 MRGPRX2Q96LB1 330 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 UBXN10Q96LJ8 280 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 CNBD2Q96M20 576 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 SERPINB11Q96P15 392 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 NPAS2Q99743 824 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 PFDN4Q9NQP4 134 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 PNPLA3Q9NST1 481 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 GID8Q9NWU2 228 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 UBAP1Q9NZ09 502 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 TMEM181Q9P2C4 612 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 CD300AQ9UGN4 299 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 PTBP2Q9UKA9 531 aaKnown RBP8.71□□□□□ -1.02
GABPB1-205ENST00000429662 NEU3Q9UQ49 428 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 VWA7Q9Y334 891 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 ASPMQ8IZT6 3477 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 CHD8Q9HCK8 2581 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 KAT6AQ92794 2004 aa8.71□□□□□ -1.02
GABPB1-205ENST00000429662 MAP1BP46821 2468 aaKnown RBP8.7□□□□□ -1.02
GABPB1-205ENST00000429662 KANSL1LA0AUZ9 987 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 KCNU1A8MYU2 1149 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 M0QZQ0 153 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 MRASO14807 208 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 HNRNPRO43390 633 aaKnown RBP8.7□□□□□ -1.02
GABPB1-205ENST00000429662 ZNF623O75123 536 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 PMPCBO75439 489 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 RNASEH2AO75792 299 aaKnown RBP8.7□□□□□ -1.02
GABPB1-205ENST00000429662 MT-CYBP00156 380 aaPredicted RBP8.7□□□□□ -1.02
GABPB1-205ENST00000429662 AMHP03971 560 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 ASLP04424 464 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 HLA-DQB2P05538 268 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 FCGR1AP12314 374 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 BMP2P12643 396 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 ZNF23P17027 643 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 RHOQP17081 205 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 IL10P22301 178 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 SLC19A1P41440 591 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 DPP6P42658 865 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 MRPL19P49406 292 aaKnown RBP8.7□□□□□ -1.02
GABPB1-205ENST00000429662 CLCNKBP51801 687 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 MLLT6P55198 1093 aaPredicted RBP8.7□□□□□ -1.02
GABPB1-205ENST00000429662 CCL23P55773 120 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 MYBPC1Q00872 1141 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 SEPT6Q14141 434 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 IKBKEQ14164 716 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 INPP5AQ14642 412 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 NADK2Q4G0N4 442 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 PPP4R4Q6NUP7 873 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 GK5Q6ZS86 529 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 LARP4Q71RC2 724 aaKnown RBP eCLIP8.7□□□□□ -1.02
GABPB1-205ENST00000429662 DHFR2Q86XF0 187 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 MFSD6LQ8IWD5 586 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 CHERPQ8IWX8 916 aaKnown RBP8.7□□□□□ -1.02
GABPB1-205ENST00000429662 LILRA2Q8N149 483 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 NUP93Q8N1F7 819 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 UMODL1-AS1Q8N2C9 162 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 GPR150Q8NGU9 434 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 RHEBL1Q8TAI7 183 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 IMP4Q96G21 291 aaKnown RBP8.7□□□□□ -1.02
GABPB1-205ENST00000429662 SCLYQ96I15 445 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 MPP4Q96JB8 637 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 FCRL2Q96LA5 508 aaPredicted RBP8.7□□□□□ -1.02
GABPB1-205ENST00000429662 PPP1R36Q96LQ0 422 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 KLHL32Q96NJ5 620 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 GAD1Q99259 594 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 SIK2Q9H0K1 926 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 HIPK3Q9H422 1215 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 RETREG1Q9H6L5 497 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 RNF19AQ9NV58 838 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 SLC8A2Q9UPR5 921 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 MYRFQ9Y2G1 1151 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 SNX10Q9Y5X0 201 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 AK5Q9Y6K8 562 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 CEP250Q9BV73 2442 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 NLRC5Q86WI3 1866 aa8.7□□□□□ -1.02
GABPB1-205ENST00000429662 PKD1L2Q7Z442 2459 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 TRIP12Q14669 1992 aaPredicted RBP8.69□□□□□ -1.02
GABPB1-205ENST00000429662 MROH6A6NGR9 719 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 E7ENX8 843 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 E9PAM4 449 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 ZNF701M0R085 212 aaPredicted RBP8.69□□□□□ -1.02
GABPB1-205ENST00000429662 VILLO15195 856 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 DUSP11O75319 330 aaKnown RBP8.69□□□□□ -1.02
GABPB1-205ENST00000429662 WISP3O95389 354 aaPredicted RBP8.69□□□□□ -1.02
GABPB1-205ENST00000429662 MATN4O95460 622 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 H6PDO95479 791 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 EPOP01588 193 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 CCDC166P0CW27 439 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 HSD17B1P14061 328 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 BDNFP23560 247 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 CCR10P46092 362 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 HERVK_113P63132 956 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 TIGD5Q53EQ6 642 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 ZNF678Q5SXM1 525 aa8.69□□□□□ -1.02
GABPB1-205ENST00000429662 INTS11Q5TA45 600 aaKnown RBP8.69□□□□□ -1.02
GABPB1-205ENST00000429662 MARC1Q5VT66 337 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms