RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 LAPTM5Q13571 262 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 PSMD5Q16401 504 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 LPCAT1Q8NF37 534 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 ELMO1Q92556 727 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 CENPIQ92674 756 aaPredicted RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 PSMG2Q969U7 264 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.72□□□□□ -0.211e-8■■■■■ 58.8
SGMS1-203ENST00000429490 LRRC58Q96CX6 371 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 HOPXQ9BPY8 73 aaPredicted RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 GPATCH1Q9BRR8 931 aaKnown RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 KIFC1Q9BW19 673 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 CRTAC1Q9NQ79 661 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 ARL5AQ9Y689 179 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 H0Y626 953 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 J3KR12 359 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 CBFA2T3O75081 653 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 TRIM16O95361 564 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 ZNF26P17031 533 aaPredicted RBP13.71□□□□□ -0.21
SGMS1-203ENST00000429490 EDNRBP24530 442 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 DNAJB2P25686 324 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 HOXA11P31270 313 aaPredicted RBP13.71□□□□□ -0.21
SGMS1-203ENST00000429490 MFSD10Q14728 455 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 STAG3L4Q8TBR4 150 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 SYTL2Q9HCH5 934 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 CATSPERZQ9NTU4 200 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 SEPT3Q9UH03 358 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 ZNHIT2Q9UHR6 403 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 SLC30A1Q9Y6M5 507 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 TMEM247A6NEH6 219 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 TMX2-CTNND1H3BSU7 103 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 VPS26AO75436 327 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 DLGAP3O95886 979 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 CST1P01037 141 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 ALOX15P16050 662 aaPredicted RBP13.71□□□□□ -0.21
SGMS1-203ENST00000429490 TRPC1P48995 793 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 TBX4P57082 545 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 GALNT2Q10471 571 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 PPIL2Q13356 520 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 DDX39BQ13838 428 aaKnown RBP13.71□□□□□ -0.21
SGMS1-203ENST00000429490 ACAP2Q15057 778 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 FAM187BQ17R55 369 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 SLC39A12Q504Y0 691 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 PAGE2BQ5JRK9 111 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 TSTD2Q5T7W7 516 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 LRRC8DQ7L1W4 858 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 HEATR4Q86WZ0 1026 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 ZC3H7AQ8IWR0 971 aaKnown RBP13.71□□□□□ -0.21
SGMS1-203ENST00000429490 FNDC8Q8TC99 324 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 VTA1Q9NP79 307 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 DDX28Q9NUL7 540 aaKnown RBP13.71□□□□□ -0.21
SGMS1-203ENST00000429490 COMMD8Q9NX08 183 aa13.71□□□□□ -0.21
SGMS1-203ENST00000429490 NPEPPSL1A6NEC2 478 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 CBX4O00257 560 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 PDHXO00330 501 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 NME4O00746 187 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 SERPINF2P08697 491 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 IRF1P10914 325 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 SMPD1P17405 629 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 OXTRP30559 389 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 CLCQ05315 142 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 TNK2Q07912 1038 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 BNIP2Q12982 314 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 PRKG2Q13237 762 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 PMS2P3Q13401 168 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 SIM2Q14190 667 aaPredicted RBP13.71□□□□□ -0.22
SGMS1-203ENST00000429490 PKDCCQ504Y2 493 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 CCDC92Q53HC0 331 aaPredicted RBP13.71□□□□□ -0.22
SGMS1-203ENST00000429490 CRTC3Q6UUV7 619 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 SLC15A3Q8IY34 581 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 LZTR1Q8N653 840 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 TMEM102Q8N9M5 508 aaPredicted RBP13.71□□□□□ -0.22
SGMS1-203ENST00000429490 PLEKHA8Q96JA3 519 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 C3orf30Q96M34 536 aa13.71□□□□□ -0.22
SGMS1-203ENST00000429490 LEF1Q9UJU2 399 aaPredicted RBP13.71□□□□□ -0.22
SGMS1-203ENST00000429490 C17orf102A2RUQ5 167 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 MATN3O15232 486 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 GSNP06396 782 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 MMP3P08254 477 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 SERPINB1P30740 379 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 CAPGP40121 348 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 DGKQP52824 942 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 RAB39AQ14964 217 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 TLK2Q86UE8 772 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 ABI1Q8IZP0 508 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 TOP6BLQ8N6T0 577 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 SMYD1Q8NB12 490 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 NOL6Q9H6R4 1146 aaKnown RBP13.7□□□□□ -0.22
SGMS1-203ENST00000429490 COL2A1P02458 1487 aaPredicted RBP13.7□□□□□ -0.22
SGMS1-203ENST00000429490 TBX18O95935 607 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 CCNCP24863 283 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 MTHFRP42898 656 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 IST1P53990 364 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 RPL26P61254 145 aaKnown RBP13.7□□□□□ -0.22
SGMS1-203ENST00000429490 UFM1P61960 85 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 FSCN1Q16658 493 aaKnown RBP13.7□□□□□ -0.22
SGMS1-203ENST00000429490 FAM45BPQ6NSW5 357 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 CMTR2Q8IYT2 770 aaKnown RBP13.7□□□□□ -0.22
SGMS1-203ENST00000429490 ZNF513Q8N8E2 541 aaPredicted RBP13.7□□□□□ -0.22
SGMS1-203ENST00000429490 FAM45AQ8TCE6 357 aa13.7□□□□□ -0.22
SGMS1-203ENST00000429490 HM13Q8TCT9 377 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms