RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PACSIN1Q9BY11 444 aa15.48■□□□□ 0.07
SEC13-210ENST00000428626 STRADBQ9C0K7 418 aa15.48■□□□□ 0.07
SEC13-210ENST00000428626 TRNAU1APQ9NX07 287 aaKnown RBP15.48■□□□□ 0.07
SEC13-210ENST00000428626 FOXJ2Q9P0K8 574 aa15.48■□□□□ 0.07
SEC13-210ENST00000428626 RCOR3Q9P2K3 495 aaPredicted RBP15.48■□□□□ 0.07
SEC13-210ENST00000428626 ACSL6Q9UKU0 697 aa15.48■□□□□ 0.07
SEC13-210ENST00000428626 TMEM98Q9Y2Y6 226 aa15.48■□□□□ 0.07
SEC13-210ENST00000428626 ZFC3H1O60293 1989 aaKnown RBP15.47■□□□□ 0.07
SEC13-210ENST00000428626 PRAMEF33A0A0G2JMD5 474 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 A0A0J9YYE9 177 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 GOLGA6CA6NDK9 693 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 GOLGA6BA6NDN3 693 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 TMX2-CTNND1H3BSU7 103 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 MYO1FO00160 1098 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 PDE2AO00408 941 aaPredicted RBP15.47■□□□□ 0.07
SEC13-210ENST00000428626 PPM1DO15297 605 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 PRAMEF10O60809 474 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 TRBC1P01850 177 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 GOLGA6DP0CG33 693 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 TEAD1P28347 426 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 DPTQ07507 201 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 SLC10A2Q12908 348 aaPredicted RBP15.47■□□□□ 0.07
SEC13-210ENST00000428626 ARHGEF7Q14155 803 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 NR1D2Q14995 579 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 NFKBIBQ15653 356 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 TSR1Q2NL82 804 aaKnown RBP15.47■□□□□ 0.07
SEC13-210ENST00000428626 AMZ1Q400G9 498 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 CCDC122Q5T0U0 273 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 CCDC81Q6ZN84 652 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 USP53Q70EK8 1073 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 BBS5Q8N3I7 341 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 PQLC3Q8N755 202 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 ZNF564Q8TBZ8 553 aaPredicted RBP15.47■□□□□ 0.07
SEC13-210ENST00000428626 WBP1Q96G27 269 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 SCARF2Q96GP6 870 aaPredicted RBP15.47■□□□□ 0.07
SEC13-210ENST00000428626 CCNL2Q96S94 520 aaPredicted RBP15.47■□□□□ 0.07
SEC13-210ENST00000428626 GSDMCQ9BYG8 508 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 GOLGA6AQ9NYA3 693 aa15.47■□□□□ 0.07
SEC13-210ENST00000428626 SDK2Q58EX2 2172 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 C9orf172C9J069 976 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 NVLO15381 856 aaKnown RBP15.46■□□□□ 0.07
SEC13-210ENST00000428626 HLA-DQB2P05538 268 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 IVLP07476 585 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 JMJD7P0C870 316 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 CCL4P13236 92 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 WT1P19544 449 aaPredicted RBP15.46■□□□□ 0.07
SEC13-210ENST00000428626 CASP14P31944 242 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 SSR1P43307 286 aaKnown RBP15.46■□□□□ 0.07
SEC13-210ENST00000428626 ARSDP51689 593 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 GBE1Q04446 702 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 ITKQ08881 620 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 ILF3Q12906 894 aaKnown RBP eCLIP15.46■□□□□ 0.071e-6■■■□□ 16.4
SEC13-210ENST00000428626 ANKRD20A8PQ5CZ79 823 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 USP45Q70EL2 814 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 ZFAND4Q86XD8 727 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 KIAA1524Q8TCG1 905 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 NSMCE1Q8WV22 266 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 PMEPA1Q969W9 287 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 FAF2Q96CS3 445 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 WDR24Q96S15 920 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 TDRD1Q9BXT4 1180 aaKnown RBP15.46■□□□□ 0.07
SEC13-210ENST00000428626 POLR1EQ9GZS1 481 aaKnown RBP15.46■□□□□ 0.07
SEC13-210ENST00000428626 RBM22Q9NW64 420 aaKnown RBP eCLIP15.46■□□□□ 0.073e-13■■■■■ 30.5
SEC13-210ENST00000428626 KCTD5Q9NXV2 234 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 CHKBQ9Y259 395 aa15.46■□□□□ 0.07
SEC13-210ENST00000428626 MATN3O15232 486 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 PROSCO94903 275 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 EML2O95834 649 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 CD1CP29017 333 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 ALDH4A1P30038 563 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 GPR1P46091 355 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 STC1P52823 247 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 PYCR3Q53H96 274 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 PHF19Q5T6S3 580 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 NKAIN2Q5VXU1 208 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 ADAMTSL4Q6UY14 1074 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 MARK2Q7KZI7 788 aaKnown RBP15.45■□□□□ 0.06
SEC13-210ENST00000428626 ZNF605Q86T29 641 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 LRRC49Q8IUZ0 686 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 RCBTB1Q8NDN9 531 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 USP7Q93009 1102 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 AP2M1Q96CW1 435 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 TSGA13Q96PP4 275 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 RIOK2Q9BVS4 552 aaKnown RBP15.45■□□□□ 0.06
SEC13-210ENST00000428626 WDR70Q9NW82 654 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.45■□□□□ 0.06
SEC13-210ENST00000428626 IFNKQ9P0W0 207 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 CNOT6Q9ULM6 557 aaKnown RBP15.45■□□□□ 0.06
SEC13-210ENST00000428626 LUC7L2Q9Y383 392 aaKnown RBP15.45■□□□□ 0.06
SEC13-210ENST00000428626 OAS3Q9Y6K5 1087 aaKnown RBP15.45■□□□□ 0.06
SEC13-210ENST00000428626 TLN1Q9Y490 2541 aaKnown RBP15.45■□□□□ 0.06
SEC13-210ENST00000428626 ASH1LQ9NR48 2969 aaKnown RBP15.45■□□□□ 0.06
SEC13-210ENST00000428626 BOD1L1Q8NFC6 3051 aa15.45■□□□□ 0.06
SEC13-210ENST00000428626 IGHV5-10-1A0A0J9YXX1 117 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 CAPN8A6NHC0 703 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 RHPN2P1A8MT19 583 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 CLDN7O95471 211 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 CPNE6O95741 557 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 MMP2P08253 660 aa15.44■□□□□ 0.06
SEC13-210ENST00000428626 CSF2RBP32927 897 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms