RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 FAM182AQ5T1J6 154 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 TMEM164Q5U3C3 297 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 ATG14Q6ZNE5 492 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 POLNQ7Z5Q5 900 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 TECPR1Q7Z6L1 1165 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 PSTKQ8IV42 348 aaKnown RBP16.49■□□□□ 0.23
VARS-216ENST00000428445 AOPEPQ8N6M6 819 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 LRRN4Q8WUT4 740 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 PIH1D2Q8WWB5 315 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 ZNF653Q96CK0 615 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 BTBD6Q96KE9 485 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 MGME1Q9BQP7 344 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 AKAP7Q9P0M2 348 aaPredicted RBP16.49■□□□□ 0.23
VARS-216ENST00000428445 SLC17A4Q9Y2C5 497 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 PRKAB1Q9Y478 270 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 STMND1H3BQB6 276 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 H3BRJ5 948 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 SOCS5O75159 536 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 PGLSO95336 258 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 CYP2A6P11509 494 aaPredicted RBP16.48■□□□□ 0.23
VARS-216ENST00000428445 UGT1A3P35503 534 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 IL22RA1Q8N6P7 574 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 SCRN2Q96FV2 425 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 ZNF599Q96NL3 588 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 CSPG4P5Q96PW8 444 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 CTRCQ99895 268 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 NT5MQ9NPB1 228 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 SLC39A1Q9NY26 324 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 KCNK4Q9NYG8 393 aa16.48■□□□□ 0.23
VARS-216ENST00000428445 EFCAB7A8K855 629 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.47■□□□□ 0.23
VARS-216ENST00000428445 HGSO14964 777 aaPredicted RBP16.47■□□□□ 0.23
VARS-216ENST00000428445 INPP4BO15327 924 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 IVLP07476 585 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 RARAP10276 462 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 THRAP10827 490 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 CD82P27701 267 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 PPM1FP49593 454 aaPredicted RBP16.47■□□□□ 0.23
VARS-216ENST00000428445 PTSQ03393 145 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 ITKQ08881 620 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 MMRN1Q13201 1228 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 DPYSL2Q16555 572 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 STX1AQ16623 288 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 ARMC12Q5T9G4 340 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 LRRC66Q68CR7 880 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 ANKS6Q68DC2 871 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 TMCO3Q6UWJ1 677 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 XKR5Q6UX68 686 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 FAM129CQ86XR2 697 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 LZTR1Q8N653 840 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 OR4D9Q8NGE8 314 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 GBP4Q96PP9 640 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 SEMA3CQ99985 751 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 SLC25A18Q9H1K4 315 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.47■□□□□ 0.23
VARS-216ENST00000428445 GEMIN8Q9NWZ8 242 aaKnown RBP16.47■□□□□ 0.23
VARS-216ENST00000428445 KCTD5Q9NXV2 234 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 MAST4O15021 2626 aa16.47■□□□□ 0.23
VARS-216ENST00000428445 A0A1W2PQ67 120 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 MAP3K6O95382 1288 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 GZMAP12544 262 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 CSTF2P33240 577 aaKnown RBP eCLIP16.46■□□□□ 0.23
VARS-216ENST00000428445 ARL4AP40617 200 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 MMP13P45452 471 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 GPR3P46089 330 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 SKIDA1Q1XH10 827 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 PYCR3Q53H96 274 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 COLEC12Q5KU26 742 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 MARC1Q5VT66 337 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 NRSN1Q8IZ57 195 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 UNC5BQ8IZJ1 945 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 CACNA2D3Q8IZS8 1091 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 ATPAF2Q8N5M1 289 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 AGBL5Q8NDL9 886 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 SLC37A2Q8TED4 501 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 SPOCK2Q92563 424 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 AP2M1Q96CW1 435 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 SCARF2Q96GP6 870 aaPredicted RBP16.46■□□□□ 0.23
VARS-216ENST00000428445 OR2M4Q96R27 311 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 MCCC1Q96RQ3 725 aaPredicted RBP16.46■□□□□ 0.23
VARS-216ENST00000428445 RTN4Q9NQC3 1192 aaKnown RBP16.46■□□□□ 0.23
VARS-216ENST00000428445 NAV2Q8IVL1 2488 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 SPTA1P02549 2419 aa16.46■□□□□ 0.23
VARS-216ENST00000428445 GOLGA6L22H0YM25 854 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 NKX2-8O15522 239 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 RAD1O60671 282 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 PPFIA2O75334 1257 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 ASMTLO95671 621 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 ATP1A1P05023 1023 aaKnown RBP16.45■□□□□ 0.22
VARS-216ENST00000428445 CD48P09326 243 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 ATP1A2P50993 1020 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 TLE1Q04724 770 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 DPTQ07507 201 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 TMEM71Q6P5X7 295 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 CPNE8Q86YQ8 564 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 RIOK2Q9BVS4 552 aaKnown RBP16.45■□□□□ 0.22
VARS-216ENST00000428445 B3GNT4Q9C0J1 378 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 ZMYND15Q9H091 742 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 PCDH18Q9HCL0 1135 aa16.45■□□□□ 0.22
VARS-216ENST00000428445 ZNHIT2Q9UHR6 403 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms