RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 SLC22A3O75751 556 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 SNAP29O95721 258 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 SLC26A3P40879 764 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 CCT8P50990 548 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 PRKG2Q13237 762 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 VGLL4Q14135 290 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 PCBP1Q15365 356 aaKnown RBP eCLIP10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 ZNF678Q5SXM1 525 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 MARC1Q5VT66 337 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 TMEM214Q6NUQ4 689 aaKnown RBP10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 DPP9Q86TI2 863 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 TMEM151AQ8N4L1 468 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 STAG3L4Q8TBR4 150 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 SMARCD1Q96GM5 515 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 SENP8Q96LD8 212 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 TSGA13Q96PP4 275 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 TSPAN18Q96SJ8 248 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 C17orf80Q9BSJ5 609 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 OSBPL2Q9H1P3 480 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 ELP3Q9H9T3 547 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 SEMA4BQ9NPR2 832 aaPredicted RBP10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 IGSF5Q9NSI5 407 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 GPC6Q9Y625 555 aaPredicted RBP10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 PIRO00625 290 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 TPD52L2O43399 206 aaKnown RBP10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 SYNCRIPO60506 623 aaKnown RBP10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 KCNA5P22460 613 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 CHRNA4P43681 627 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 ARHGDIAP52565 204 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 ADGRG5Q8IZF4 528 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 OR7A2PQ8NGA2 310 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 TSPEARQ8WU66 669 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 NT5C3BQ969T7 300 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 ARMC7Q9H6L4 198 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 ANKRD12Q6UB98 2062 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 SLC7A4O43246 635 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 RAD51Q06609 339 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 TGFBIQ15582 683 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 DGUOKQ16854 277 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 TIGD2Q4W5G0 525 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 FNDC5Q8NAU1 212 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 OR6J1Q8NGC5 347 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 ADAMTS16Q8TE57 1224 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 GLMNQ92990 594 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 A0A1W2PP18 115 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 ABCB7O75027 752 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 GPX3P22352 226 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 SLC6A2P23975 617 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 CA8P35219 290 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 DAG1Q14118 895 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 IMPG1Q17R60 797 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 RBM48Q5RL73 367 aaKnown RBP10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 LDLRAP1Q5SW96 308 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 NOL9Q5SY16 702 aaKnown RBP10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 FAM126BQ8IXS8 530 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 RORBQ92753 470 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 DACH2Q96NX9 599 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 THUMPD3Q9BV44 507 aaKnown RBP10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 SCN3BQ9NY72 215 aa10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 TIMM13Q9Y5L4 95 aaPredicted RBP10.74□□□□□ -0.69
ATP2C1-204ENST00000428331 H3BMM5 538 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 TULP3O75386 442 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 NDUFS3O75489 264 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 MBL2P11226 248 aaPredicted RBP10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 PCNAP12004 261 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 CXCR3P49682 368 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 SLC15A4Q8N697 577 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 PPTC7Q8NI37 304 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 BLOC1S5Q8TDH9 187 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 VPS33AQ96AX1 596 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 MUS81Q96NY9 551 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 GSTO2Q9H4Y5 243 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 SOX17Q9H6I2 414 aaPredicted RBP10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 PTCH2Q9Y6C5 1203 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 M0QZ92 97 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 BEST1O76090 585 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 S100BP04271 92 aaPredicted RBP10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 CYBBP04839 570 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 ANXA6P08133 673 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 BAG6P46379 1132 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 RPL34P49207 117 aaKnown RBP10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 LCP2Q13094 533 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 RABL3Q5HYI8 236 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 COQ5Q5HYK3 327 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 ANKRD26P1Q6NSI1 321 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 LDB1Q86U70 411 aaPredicted RBP10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 RETREG3Q86VR2 466 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 OSTM1Q86WC4 334 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 CCDC117Q8IWD4 279 aaPredicted RBP10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 TMEM86AQ8N2M4 240 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 AADATQ8N5Z0 425 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 CHPT1Q8WUD6 406 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 FAM162AQ96A26 154 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 DCPSQ96C86 337 aaKnown RBP10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 WDR6Q9NNW5 1121 aaKnown RBP10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 VTA1Q9NP79 307 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 CMTM6Q9NX76 183 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 ERGIC3Q9Y282 383 aa10.73□□□□□ -0.69
ATP2C1-204ENST00000428331 SPTLC1O15269 473 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms