RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 MECRQ9BV79 373 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 KATNAL1Q9BW62 490 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 RBM4Q9BWF3 364 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 TRIM54Q9BYV2 358 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 WDR11Q9BZH6 1224 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 REXO4Q9GZR2 422 aaKnown RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 RACGAP1Q9H0H5 632 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM49AQ9H0Q0 323 aaPredicted RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 RIOX1Q9H6W3 641 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 TRIM45Q9H8W5 580 aaPredicted RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 KANSL2Q9H9L4 492 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 KIAA1551Q9HCM1 1747 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 DCP1AQ9NPI6 582 aaPredicted RBP5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 POLE3Q9NRF9 147 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ADPRHL2Q9NX46 363 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 PPP1R14DQ9NXH3 145 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMEM181Q9P2C4 612 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF639Q9UID6 485 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAGEL2Q9UJ55 1249 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 GGA1Q9UJY5 639 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 GMEB2Q9UKD1 530 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 STUB1Q9UNE7 303 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 BAIAP2Q9UQB8 552 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 AURKCQ9UQB9 309 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ERVW-1Q9UQF0 538 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 PRELID3BQ9Y3B1 194 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 TBX22Q9Y458 520 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 AFG3L2Q9Y4W6 797 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 PCDHA11Q9Y5I1 949 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 LYVE1Q9Y5Y7 322 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNFX1Q9P2E3 1918 aaKnown RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 RGPD2P0DJD1 1756 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CNTNAP4Q9C0A0 1308 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM92AA1XBS5 289 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CCDC154A6NI56 674 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 EFCAB9A8MZ26 197 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 BTN3A3O00478 584 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 KPNA3O00505 521 aaPredicted RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 TGFB1I1O43294 461 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 TBX1O43435 398 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 VPS4BO75351 444 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 SOAT2O75908 522 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CDK14O94921 469 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 SNAP29O95721 258 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ASNSP08243 561 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 SUPT20HL2P0C7V6 817 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ACADMP11310 421 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 NPR1P16066 1061 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 PDGFRAP16234 1089 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 PGAM1P18669 254 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 FGFR3P22607 806 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAOBP27338 520 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 WEE1P30291 646 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CYP2C18P33260 490 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 RYKP34925 604 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 RFC2P35250 354 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CDKN2BP42772 138 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ARCN1P48444 511 aaKnown RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 HCAR3P49019 387 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 HOXA1P49639 335 aaPredicted RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CASP4P49662 377 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CEBPAP49715 358 aaPredicted RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CLCNKBP51801 687 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 GBX2P52951 348 aaPredicted RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 VBP1P61758 197 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 YWHAZP63104 245 aaKnown RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 SPIRE1Q08AE8 756 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAPQ12884 760 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAB21L1Q13394 359 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 DAG1Q14118 895 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 FASTKQ14296 549 aaKnown RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 COL28A1Q2UY09 1125 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CYBRD1Q53TN4 286 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZC3H12BQ5HYM0 836 aaKnown RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 GLRA4Q5JXX5 417 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ODR4Q5SWX8 454 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 C6orf141Q5SZD1 244 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 TPRG1LQ5T0D9 272 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZBTB37Q5TC79 503 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 XAF1Q6GPH4 301 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 TYW3Q6IPR3 259 aaKnown RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 TIGD7Q6NT04 549 aaPredicted RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZYG11AQ6WRX3 759 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 NSMFQ6X4W1 530 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CATSPER4Q7RTX7 472 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF720Q7Z2F6 126 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 PAGE2Q7Z2X7 111 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC47A2Q86VL8 602 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZDHHC13Q8IUH4 622 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 C10orf107Q8IVU9 208 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 LRRC47Q8N1G4 583 aaKnown RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 LINC00528Q8N1L1 170 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 MINDY1Q8N5J2 469 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 KDM1BQ8NB78 822 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMEM35BQ8NCS4 154 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 PAPD5Q8NDF8 572 aaKnown RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMIEQ8NEW7 156 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 FANK1Q8TC84 345 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 HERVK_113Q902F9 699 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms