RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ALYREFQ86V81 257 aaKnown RBP24.39■■□□□ 1.5
VEGFA-209ENST00000425836 DCP2Q8IU60 420 aaKnown RBP24.39■■□□□ 1.5
VEGFA-209ENST00000425836 TRIM51Q9BSJ1 452 aa24.39■■□□□ 1.5
VEGFA-209ENST00000425836 GTPBP2Q9BX10 602 aaKnown RBP24.39■■□□□ 1.5
VEGFA-209ENST00000425836 CDH19Q9H159 772 aa24.39■■□□□ 1.5
VEGFA-209ENST00000425836 GDF3Q9NR23 364 aa24.39■■□□□ 1.5
VEGFA-209ENST00000425836 RAD18Q9NS91 495 aa24.39■■□□□ 1.5
VEGFA-209ENST00000425836 LDB2O43679 373 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 CRTAMO95727 393 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 LPOP22079 712 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-209ENST00000425836 IVDP26440 423 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 TEAD1P28347 426 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 GPR1P46091 355 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 DCDC1P59894 354 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 MRPS25P82663 173 aaKnown RBP24.38■■□□□ 1.49
VEGFA-209ENST00000425836 PDE1CQ14123 709 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-209ENST00000425836 HLA-BQ31612 363 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 AASDHQ4L235 1098 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-209ENST00000425836 ALS2CLQ60I27 953 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 IL27RAQ6UWB1 636 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 ZNF534Q76KX8 674 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 OR2I1PQ8NGU4 316 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 FUBP1Q96AE4 644 aaKnown RBP24.38■■□□□ 1.49
VEGFA-209ENST00000425836 NFKBIL1Q9UBC1 381 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-209ENST00000425836 PKP3Q9Y446 797 aa24.38■■□□□ 1.49
VEGFA-209ENST00000425836 STX7O15400 261 aaKnown RBP24.37■■□□□ 1.49
VEGFA-209ENST00000425836 TMEM63AO94886 807 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 PRAMEF14Q5SWL7 426 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 NAT8LQ8N9F0 302 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 OR4K2Q8NGD2 314 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 EDEM2Q9BV94 578 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 TEX101Q9BY14 249 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 WDR26Q9H7D7 661 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 SPTY2D1-AS1A0A0U1RR47 76 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 PPFIA2O75334 1257 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 HOXC4P09017 264 aaPredicted RBP24.37■■□□□ 1.49
VEGFA-209ENST00000425836 ATXN3P54252 364 aaPredicted RBP24.37■■□□□ 1.49
VEGFA-209ENST00000425836 FZD2Q14332 565 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 RNASEH2BQ5TBB1 312 aaKnown RBP24.37■■□□□ 1.49
VEGFA-209ENST00000425836 LRRC8BQ6P9F7 803 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 KIAA2013Q8IYS2 634 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 MCUQ8NE86 351 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 PLEKHG4BQ96PX9 1271 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 LGR4Q9BXB1 951 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 GAREM1Q9H706 876 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 ERVMER34-1Q9H9K5 563 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 IL26Q9NPH9 171 aa24.37■■□□□ 1.49
VEGFA-209ENST00000425836 LRRK1Q38SD2 2015 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 CDX4O14627 284 aaPredicted RBP24.36■■□□□ 1.49
VEGFA-209ENST00000425836 DNALI1O14645 258 aaPredicted RBP24.36■■□□□ 1.49
VEGFA-209ENST00000425836 RAD51CO43502 376 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 GDF9O60383 454 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 DEKP35659 375 aaKnown RBP24.36■■□□□ 1.49
VEGFA-209ENST00000425836 ZNF140P52738 457 aaPredicted RBP24.36■■□□□ 1.49
VEGFA-209ENST00000425836 THOP1P52888 689 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 SESN2P58004 480 aaPredicted RBP24.36■■□□□ 1.49
VEGFA-209ENST00000425836 PDE1BQ01064 536 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 EP300Q09472 2414 aaPredicted RBP24.36■■□□□ 1.49
VEGFA-209ENST00000425836 SEPT6Q14141 434 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 NFATC4Q14934 902 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 ZNF423Q2M1K9 1284 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 ZDHHC20Q5W0Z9 365 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 ADAMTSL4Q6UY14 1074 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 MAATS1Q7Z4T9 603 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 HEATR4Q86WZ0 1026 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 PPIL6Q8IXY8 311 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 MINDY1Q8N5J2 469 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 OR13C4Q8NGS5 318 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 IL21RQ9HBE5 538 aa24.36■■□□□ 1.49
VEGFA-209ENST00000425836 FAM187AA6NFU0 413 aa24.35■■□□□ 1.49
VEGFA-209ENST00000425836 MROH6A6NGR9 719 aa24.35■■□□□ 1.49
VEGFA-209ENST00000425836 FADS2P1A8MWK0 482 aa24.35■■□□□ 1.49
VEGFA-209ENST00000425836 AP3B1O00203 1094 aa24.35■■□□□ 1.49
VEGFA-209ENST00000425836 CACNB4O00305 520 aaPredicted RBP24.35■■□□□ 1.49
VEGFA-209ENST00000425836 PYGLP06737 847 aa24.35■■□□□ 1.49
VEGFA-209ENST00000425836 SARNPP82979 210 aaKnown RBP24.35■■□□□ 1.49
VEGFA-209ENST00000425836 CDK3Q00526 305 aa24.35■■□□□ 1.49
VEGFA-209ENST00000425836 PTK2BQ14289 1009 aa24.35■■□□□ 1.49
VEGFA-209ENST00000425836 CCDC38Q502W7 563 aa24.35■■□□□ 1.49
VEGFA-209ENST00000425836 TRAM1L1Q8N609 369 aa24.35■■□□□ 1.49
VEGFA-209ENST00000425836 ELF4Q99607 663 aaPredicted RBP24.35■■□□□ 1.49
VEGFA-209ENST00000425836 SPATA16Q9BXB7 569 aa24.35■■□□□ 1.49
VEGFA-209ENST00000425836 CNOT6Q9ULM6 557 aaKnown RBP24.35■■□□□ 1.49
VEGFA-209ENST00000425836 FNDC3AQ9Y2H6 1198 aaKnown RBP24.35■■□□□ 1.49
VEGFA-209ENST00000425836 PCDH15Q96QU1 1955 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 ZNF500O60304 480 aaPredicted RBP24.34■■□□□ 1.49
VEGFA-209ENST00000425836 CER1O95813 267 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 SPAM1P38567 509 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 NPY2RP49146 381 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 KIAA1024LP59773 190 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 IZUMO3Q5VZ72 239 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 MACC1Q6ZN28 852 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 PCGF5Q86SE9 256 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 CAND1Q86VP6 1230 aaKnown RBP24.34■■□□□ 1.49
VEGFA-209ENST00000425836 RANBP9Q96S59 729 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 C19orf43Q9BQ61 176 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 ZSCAN5AQ9BUG6 496 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 PHPT1Q9NRX4 125 aaPredicted RBP24.34■■□□□ 1.49
VEGFA-209ENST00000425836 BFARQ9NZS9 450 aa24.34■■□□□ 1.49
VEGFA-209ENST00000425836 GOLGA8MH3BSY2 632 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms