RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ARL5AQ9Y689 179 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 A0A1W2PPW3 197 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 A0A1W2PQH9 124 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 CLASP2O75122 1294 aaKnown RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 GLP2RO95838 553 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 HMBSP08397 361 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 CD1DP15813 335 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 SIRPB2Q5JXA9 342 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 BRMS1LQ5PSV4 323 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 TMEM26Q6ZUK4 368 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 GPR180Q86V85 440 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 KLHDC8BQ8IXV7 354 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 ALDH16A1Q8IZ83 802 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 ADGRG5Q8IZF4 528 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 OR13C4Q8NGS5 318 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 OR10T2Q8NGX3 314 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 GIPC3Q8TF64 312 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 GFM2Q969S9 779 aaKnown RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 DUS3LQ96G46 650 aaKnown RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 TSPAN18Q96SJ8 248 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 KCTD14Q9BQ13 255 aaPredicted RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 GPATCH1Q9BRR8 931 aaKnown RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 C1orf50Q9BV19 199 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 NAA50Q9GZZ1 169 aaKnown RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 TUBB1Q9H4B7 451 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 CSNK1G1Q9HCP0 422 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 RNF181Q9P0P0 153 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC7A4O43246 635 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 GOT2P00505 430 aaKnown RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 ODC1P11926 461 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 EEF1DP29692 281 aaKnown RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 GSK3BP49841 420 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 MLLT6P55198 1093 aaPredicted RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 KCNK10P57789 538 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 ATP6V0D1P61421 351 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 YWHAHQ04917 246 aaPredicted RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 LIPEQ05469 1076 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 GALNT1Q10472 559 aaPredicted RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 C8orf82Q6P1X6 216 aaPredicted RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 ZNF549Q6P9A3 640 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 PLEKHH3Q7Z736 793 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 SPATA2LQ8IUW3 424 aaPredicted RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 TRPV3Q8NET8 790 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 TNIP2Q8NFZ5 429 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 FNDC8Q8TC99 324 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 LZICQ8WZA0 190 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 IMP4Q96G21 291 aaKnown RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 RNF145Q96MT1 663 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 PPP1R2P1Q96PQ5 205 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 ACOX2Q99424 681 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 NOL6Q9H6R4 1146 aaKnown RBP7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 AGPAT4Q9NRZ5 378 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 ACTR3BQ9P1U1 418 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 CPA4Q9UI42 421 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 CLEC11AQ9Y240 323 aa7.51□□□□□ -1.21
SMARCC1-202ENST00000425518 BBIP1A8MTZ0 92 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 FAM155AB1AL88 458 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 F8W810 466 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 M0QZ92 97 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 FXYD1O00168 92 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 CD3EAPO15446 510 aaKnown RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 RHOBTB1O94844 696 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 SNAP29O95721 258 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 FAM163BP0C2L3 166 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 MYF6P23409 242 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 FMO4P31512 558 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 GALNT3Q14435 633 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 KCTD21Q4G0X4 260 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ALFQ53S48 1182 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 PRMT9Q6P2P2 845 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ABRAXAS1Q6UWZ7 409 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 KCTD8Q6ZWB6 473 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ZNF467Q7Z7K2 595 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 SCD5Q86SK9 330 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 RALGPS2Q86X27 583 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 CIR1Q86X95 450 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 CCDC117Q8IWD4 279 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 MINDY1Q8N5J2 469 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 MFSD2AQ8NA29 543 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 L3HYPDHQ96EM0 354 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 TEX37Q96LM6 180 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 NPLQ9BXD5 320 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 MFSD1Q9H3U5 465 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 POLG2Q9UHN1 485 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 TSR3Q9UJK0 312 aaKnown RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 RNF112Q9ULX5 631 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 GMEB1Q9Y692 573 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 CCDC162PA2VCL2 907 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ENPP3O14638 875 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 B4GAT1O43505 415 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 KPNA6O60684 536 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 PCNAP12004 261 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 PRDX3P30048 256 aaKnown RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ATP4BP51164 291 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 PSMD7P51665 324 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 NAA20P61599 178 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 UFM1P61960 85 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ADAM17P78536 824 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 CLCQ05315 142 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 BNIP2Q12982 314 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms