RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 FBXO9Q9UK97 447 aaPredicted RBP3.55□□□□□ -1.84
TOP2A-201ENST00000423485 CACNA1GO43497 2377 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 LYSTQ99698 3801 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 TENM4Q6N022 2769 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 TRIP12Q14669 1992 aaPredicted RBP3.55□□□□□ -1.84
TOP2A-201ENST00000423485 AGPSO00116 658 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 TLR4O00206 839 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 ACKR2O00590 384 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 MCF2LO15068 1137 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 CLOCKO15516 846 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 IRAK2O43187 625 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 AQP9O43315 295 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 SNX4O95219 450 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 IFNW1P05000 195 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 NUDT17P0C025 328 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 GOT1P17174 413 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 IL12BP29460 328 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 PAFAH1B1P43034 410 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 FANCCQ00597 558 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 IRF9Q00978 393 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 HLA-BQ31612 363 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 ZNF544Q6NX49 715 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 CYP20A1Q6UW02 462 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 LANCL3Q6ZV70 420 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 IRF2BP1Q8IU81 584 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 CCNJLQ8IV13 435 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 ZNF687Q8N1G0 1237 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 PLA2G15Q8NCC3 412 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 OR5L2Q8NGL0 311 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 CKAP2Q8WWK9 683 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 SHC3Q92529 594 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 APOOQ9BUR5 198 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 UBTD1Q9HAC8 227 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 DDIT4Q9NX09 232 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 UBP1Q9NZI7 540 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 CIDEBQ9UHD4 219 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 CFL2Q9Y281 166 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 EMC9Q9Y3B6 208 aa3.55□□□□□ -1.84
TOP2A-201ENST00000423485 SPIN1Q9Y657 262 aaPredicted RBP3.55□□□□□ -1.84
TOP2A-201ENST00000423485 TENM1Q9UKZ4 2725 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 NPHP3-ACAD11A0A0J9YXS1 232 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 IQANK1A0A1B0GTG1 560 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 A0A1B0GUA9 196 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 A8MVJ9 347 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PIK3CDO00329 1044 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PIK3R2O00459 728 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TRIM24O15164 1050 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TLX3O43711 291 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PLA2G6O60733 806 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PFKFB2O60825 505 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ADAMTS4O75173 837 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TOM1L1O75674 476 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 RFPL2O75678 378 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CRTAMO95727 393 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 FTH1P02794 183 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PAEPP09466 180 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ZNF865P0CJ78 1059 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CMA1P23946 247 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CYP2F1P24903 491 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 HCAR3P49019 387 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ART1P52961 327 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CNGA3Q16281 694 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 DEFB133Q30KQ1 61 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ZNF585AQ6P3V2 769 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ABHD12BQ7Z5M8 362 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 KBTBD2Q8IY47 623 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SCCPDHQ8NBX0 429 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ZNF354BQ96LW1 612 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SH3GL3Q99963 347 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 AP1M1Q9BXS5 423 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 FAM49BQ9NUQ9 324 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 HPF1Q9NWY4 346 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 APEX2Q9UBZ4 518 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TBX21Q9UL17 535 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 MMP17Q9ULZ9 603 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 GMEB1Q9Y692 573 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SCINQ9Y6U3 715 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 WDR27A2RRH5 827 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 C5orf58C9J3I9 102 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 GRAP2O75791 330 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 EGFP01133 1207 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PRKCGP05129 697 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PSMA2P25787 234 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CORO1AP31146 461 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 NBL1P41271 181 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 RWDD2BP57060 319 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 NUP107P57740 925 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 NFKB2Q00653 900 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 IFT88Q13099 833 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 CBX3Q13185 183 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TMEM35AQ53FP2 167 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SPATA1Q5VX52 437 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 HMBOX1Q6NT76 420 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 GPAT2Q6NUI2 795 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 TRIM65Q6PJ69 517 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 ADGRA1Q86SQ6 560 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SERINC5Q86VE9 423 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 BRSK2Q8IWQ3 736 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SLC39A11Q8N1S5 342 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms