RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 SLC25A51Q9H1U9 297 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 STN1Q9H668 368 aaKnown RBP8.62□□□□□ -1.03
MDC1-204ENST00000422266 ZFYVE1Q9HBF4 777 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 MAGEE1Q9HCI5 957 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 FGF22Q9HCT0 170 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 SIRPGQ9P1W8 387 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 VPS18Q9P253 973 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 SLC17A4Q9Y2C5 497 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 EFR3BQ9Y2G0 817 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 PCDHA13Q9Y5I0 950 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 ALG6Q9Y672 507 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 FAM208BQ5VWN6 2430 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 FRYQ5TBA9 3013 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 SHROOM3Q8TF72 1996 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 TTC24A2A3L6 582 aaPredicted RBP8.61□□□□□ -1.03
MDC1-204ENST00000422266 C3orf70A6NLC5 250 aaPredicted RBP8.61□□□□□ -1.03
MDC1-204ENST00000422266 RHPN2P1A8MT19 583 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 BTNL10A8MVZ5 291 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 B4DGG1 531 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 KCNK1O00180 336 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 MAP3K6O95382 1288 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 EPOP01588 193 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 CEACAM5P06731 702 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 PDHA1P08559 390 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 CTPS1P17812 591 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 GM2AP17900 193 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 CCKBRP32239 447 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 CD86P42081 329 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 CDKN2BP42772 138 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 GNPDA1P46926 289 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 SPINT3P49223 89 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 INHBCP55103 352 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 NAP1L1P55209 391 aaKnown RBP8.61□□□□□ -1.03
MDC1-204ENST00000422266 DCDC1P59894 354 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 CDK18Q07002 472 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 SLC10A2Q12908 348 aaPredicted RBP8.61□□□□□ -1.03
MDC1-204ENST00000422266 HLTFQ14527 1009 aaKnown RBP eCLIP8.61□□□□□ -1.03
MDC1-204ENST00000422266 PPP2R5EQ16537 467 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 DAAM2Q86T65 1068 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 GALNT13Q8IUC8 556 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 CCNJLQ8IV13 435 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 CCDC50Q8IVM0 306 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 KYQ8NBH2 561 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 LPCAT1Q8NF37 534 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 ZDHHC1Q8WTX9 485 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 HNRNPLLQ8WVV9 542 aaKnown RBP8.61□□□□□ -1.03
MDC1-204ENST00000422266 CCDC74AQ96AQ1 378 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 SH3KBP1Q96B97 665 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 RNF25Q96BH1 459 aaPredicted RBP8.61□□□□□ -1.03
MDC1-204ENST00000422266 IMP4Q96G21 291 aaKnown RBP8.61□□□□□ -1.03
MDC1-204ENST00000422266 SCARF2Q96GP6 870 aaPredicted RBP8.61□□□□□ -1.03
MDC1-204ENST00000422266 AGAP3Q96P47 875 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 DCBLD2Q96PD2 775 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 OR2M4Q96R27 311 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 CMKLR1Q99788 373 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 ZSCAN5AQ9BUG6 496 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 LGR4Q9BXB1 951 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 ABCG8Q9H221 673 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 LRRN3Q9H3W5 708 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 FAM83DQ9H4H8 585 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 TRABDQ9H4I3 376 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 SYNDIG1Q9H7V2 258 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 MRPL40Q9NQ50 206 aaKnown RBP8.61□□□□□ -1.03
MDC1-204ENST00000422266 SEPT10Q9P0V9 454 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 LRIT1Q9P2V4 623 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 TRHDEQ9UKU6 1024 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 PNMA8BQ9ULN7 279 aaPredicted RBP8.61□□□□□ -1.03
MDC1-204ENST00000422266 SUFUQ9UMX1 484 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 ENTPD2Q9Y5L3 495 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 EPN1Q9Y6I3 576 aaPredicted RBP8.61□□□□□ -1.03
MDC1-204ENST00000422266 FREM2Q5SZK8 3169 aa8.61□□□□□ -1.03
MDC1-204ENST00000422266 CCDC66A2RUB6 948 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 OR5K4A6NMS3 321 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 EIF4E1BA6NMX2 242 aaKnown RBP8.6□□□□□ -1.03
MDC1-204ENST00000422266 D6RAR5 112 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 PLD2O14939 933 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 CST8O60676 142 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 PPFIA2O75334 1257 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 STK10O94804 968 aaKnown RBP8.6□□□□□ -1.03
MDC1-204ENST00000422266 NDUFA10O95299 355 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 CLDN7O95471 211 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 ASMTLO95671 621 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 PRLP01236 227 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 MPOP05164 745 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 RPLP0P05388 317 aaKnown RBP8.6□□□□□ -1.03
MDC1-204ENST00000422266 ITGA2BP08514 1039 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 TNNT1P13805 278 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 CTNNA2P26232 953 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 GPLD1P80108 840 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 SKOR1P84550 965 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 NIPAL4Q0D2K0 466 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 XRCC4Q13426 336 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 TAZQ16635 292 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 COL28A1Q2UY09 1125 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 PERM1Q5SV97 790 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 HENMT1Q5T8I9 393 aaKnown RBP8.6□□□□□ -1.03
MDC1-204ENST00000422266 CCDC181Q5TID7 509 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 TMEM164Q5U3C3 297 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 TSPAN33Q86UF1 283 aa8.6□□□□□ -1.03
MDC1-204ENST00000422266 PIM3Q86V86 326 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms