RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 F9P00740 461 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 CGAP01215 116 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 ATP1A1P05023 1023 aaKnown RBP3.9□□□□□ -1.79
LINC00397-201ENST00000422074 CTAGE8P0CG41 777 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 CORO1AP31146 461 aaKnown RBP3.9□□□□□ -1.79
LINC00397-201ENST00000422074 ABCD1P33897 745 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 GGT5P36269 586 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 GNAQP50148 359 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 PDE1BQ01064 536 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 DHX8Q14562 1220 aaKnown RBP3.9□□□□□ -1.79
LINC00397-201ENST00000422074 FAM72AQ5TYM5 149 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 FRG2Q64ET8 278 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 HIST2H2BCQ6DN03 193 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 HIST2H2BDQ6DRA6 164 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 FAM72DQ6L9T8 149 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 INO80CQ6PI98 192 aaPredicted RBP3.9□□□□□ -1.79
LINC00397-201ENST00000422074 BRAT1Q6PJG6 821 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 ASB18Q6ZVZ8 466 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 SLC46A3Q7Z3Q1 461 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 SLC9B2Q86UD5 537 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 FAM72BQ86X60 149 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 NRROSQ86YC3 692 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 CTAGE4Q8IX94 777 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 HTRA1Q92743 480 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 PPP1R13BQ96KQ4 1090 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 DUX3Q96PT4 197 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 SARDHQ9UL12 918 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 DLGAP4Q9Y2H0 992 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 KDM3AQ9Y4C1 1321 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 TTC36A6NLP5 189 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 SLC22A3O75751 556 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 MYOD1P15172 320 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 PAX1P15863 534 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 EEF1A1P68104 462 aaKnown RBP3.89□□□□□ -1.79
LINC00397-201ENST00000422074 SORDQ00796 357 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 FGFBP1Q14512 234 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 DECR1Q16698 335 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 GSTA3Q16772 222 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 ALG11Q2TAA5 492 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 CCNYL2Q5T2Q4 361 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 SLC9C2Q5TAH2 1124 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 EEF1A1P5Q5VTE0 462 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 PLA2G4FQ68DD2 849 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 PQLC2Q6ZP29 291 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 HAPLN4Q86UW8 402 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 KLHDC8BQ8IXV7 354 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 PCDH20Q8N6Y1 951 aaKnown RBP3.89□□□□□ -1.79
LINC00397-201ENST00000422074 NFKBIDQ8NI38 313 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 LRRC8CQ8TDW0 803 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 NR1H4Q96RI1 486 aaPredicted RBP3.89□□□□□ -1.79
LINC00397-201ENST00000422074 SYT17Q9BSW7 474 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 IFIH1Q9BYX4 1025 aaKnown RBP3.89□□□□□ -1.79
LINC00397-201ENST00000422074 WASH6PQ9NQA3 447 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 ASAH2Q9NR71 780 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 SAGE1Q9NXZ1 904 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 ACSL5Q9ULC5 683 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 LOXL2Q9Y4K0 774 aa3.89□□□□□ -1.79
LINC00397-201ENST00000422074 LRRFIP2Q9Y608 721 aaKnown RBP3.89□□□□□ -1.79
LINC00397-201ENST00000422074 CAPN9O14815 690 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 SEC31AO94979 1220 aaKnown RBP3.88□□□□□ -1.79
LINC00397-201ENST00000422074 CLCN3P51790 818 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 HILS1P60008 231 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 CSNK2A1P68400 391 aaPredicted RBP3.88□□□□□ -1.79
LINC00397-201ENST00000422074 GRIK2Q13002 908 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 GAGE5Q13069 117 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 GAGE6Q13070 117 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 GTF2H2Q13888 395 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 ZNF234Q14588 700 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 CEP85LQ5SZL2 805 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 IRAK1BP1Q5VVH5 260 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 GTF2H2CQ6P1K8 395 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 DUS1LQ6P1R4 473 aaKnown RBP3.88□□□□□ -1.79
LINC00397-201ENST00000422074 CACNA2D4Q7Z3S7 1137 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 ZNF354CQ86Y25 554 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 BEST3Q8N1M1 668 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 CSNK2A3Q8NEV1 391 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 DMBX1Q8NFW5 382 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 PIGTQ969N2 578 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 WBP2Q969T9 261 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 RHBDF1Q96CC6 855 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 RNF125Q96EQ8 232 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 MTERF1Q99551 399 aaKnown RBP3.88□□□□□ -1.79
LINC00397-201ENST00000422074 CMKLR1Q99788 373 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 HCFC1R1Q9NWW0 138 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 RRN3Q9NYV6 651 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 PDP2Q9P2J9 529 aa3.88□□□□□ -1.79
LINC00397-201ENST00000422074 RRN3P2A6NIE6 340 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 LRRC53A6NM62 1247 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 WDR1O75083 606 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 AMBPP02760 352 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 FMO5P49326 533 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 MMP14P50281 582 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 BIRC3Q13489 604 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 OLIG2Q13516 323 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 DRAP1Q14919 205 aaPredicted RBP3.87□□□□□ -1.79
LINC00397-201ENST00000422074 SIGIRRQ6IA17 410 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 ZNF280DQ6N043 979 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 CERS3Q8IU89 383 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 CADM4Q8NFZ8 388 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 OR5R1Q8NH85 324 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms