RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 NIPAL4Q0D2K0 466 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 ILF3Q12906 894 aaKnown RBP eCLIP11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 NFATC3Q12968 1075 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 PIGHQ14442 188 aaPredicted RBP11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 LINC00303Q3SY05 128 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 ZFYVE27Q5T4F4 411 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 PPP1R2P3Q6NXS1 205 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 TECPR1Q7Z6L1 1165 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 PIM3Q86V86 326 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 SLITRK4Q8IW52 837 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 NAGSQ8N159 534 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 CBARPQ8N350 705 aaPredicted RBP11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 BBS5Q8N3I7 341 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 LPCAT1Q8NF37 534 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 TRIM11Q96F44 468 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 CCDC97Q96F63 343 aaPredicted RBP11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 SCRN2Q96FV2 425 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 CCDC74BQ96LY2 380 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 MGME1Q9BQP7 344 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 GSDMCQ9BYG8 508 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 CEP41Q9BYV8 373 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 ZMYND15Q9H091 742 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 BRD8Q9H0E9 1235 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 RBM22Q9NW64 420 aaKnown RBP eCLIP11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 IP6K2Q9UHH9 426 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 ARHGEF17Q96PE2 2063 aaPredicted RBP11.3□□□□□ -0.6
NDUFA3-208ENST00000422029 ZNF462Q96JM2 2506 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 IGHV5-10-1A0A0J9YXX1 117 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 TMX2-CTNND1H3BSU7 103 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 J3QKU1 62 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 PDE2AO00408 941 aaPredicted RBP11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 SNX2O60749 519 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 SOD1P00441 154 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 SLC4A1P02730 911 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 CYP1A2P05177 515 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 HOXC4P09017 264 aaPredicted RBP11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 PIRTP0C851 137 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 MAPK9P45984 424 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 UBASH3AP57075 661 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 PTSQ03393 145 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 GBE1Q04446 702 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 SLC10A2Q12908 348 aaPredicted RBP11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 DPYSL3Q14195 570 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 MANEAQ5SRI9 462 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 NCBP2-AS2Q69YL0 99 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 USP45Q70EL2 814 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 PRICKLE2Q7Z3G6 844 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 HOMEZQ8IX15 550 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 KCTD6Q8NC69 237 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 LSM14AQ8ND56 463 aaKnown RBP11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 CCNYQ8ND76 341 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 OR6C4Q8NGE1 309 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 KIAA1524Q8TCG1 905 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 CMKLR1Q99788 373 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 CTRCQ99895 268 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 FUCA2Q9BTY2 467 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 IFNKQ9P0W0 207 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 KLHL3Q9UH77 587 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 ZNHIT2Q9UHR6 403 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 PCDHGA7Q9Y5G6 932 aa11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 OAS3Q9Y6K5 1087 aaKnown RBP11.29□□□□□ -0.6
NDUFA3-208ENST00000422029 MYO1FO00160 1098 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 KCNK1O00180 336 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 NVLO15381 856 aaKnown RBP11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 NUDT21O43809 227 aaKnown RBP11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 SLC28A2O43868 658 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 CPNE6O95741 557 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 SERPING1P05155 500 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 HLA-DQB2P05538 268 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 FGF3P11487 239 aaPredicted RBP11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 TNNT1P13805 278 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 CSF2RBP32927 897 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 HSPA9P38646 679 aaKnown RBP11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 GARSP41250 739 aaKnown RBP11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 ARSDP51689 593 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 ARSEP51690 589 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 NFATC2Q13469 925 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 LLGL1Q15334 1064 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 TSR1Q2NL82 804 aaKnown RBP11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 ANKRD20A8PQ5CZ79 823 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 ALS2CLQ60I27 953 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 ALKBH5Q6P6C2 394 aaKnown RBP11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 CHST15Q7LFX5 561 aaPredicted RBP11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 PQLC3Q8N755 202 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 TEKT4Q8WW24 435 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 ART4Q93070 314 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 MED8Q96G25 268 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 OR2M4Q96R27 311 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 ARHGAP9Q9BRR9 750 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 TRNAU1APQ9NX07 287 aaKnown RBP11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 OCIAD1Q9NX40 245 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 KCNK4Q9NYG8 393 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 CTTNBP2NLQ9P2B4 639 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 KCNK6Q9Y257 313 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 SLC17A4Q9Y2C5 497 aa11.28□□□□□ -0.6
NDUFA3-208ENST00000422029 HELZ2Q9BYK8 2649 aaKnown RBP11.27□□□□□ -0.6
NDUFA3-208ENST00000422029 SCN8AQ9UQD0 1980 aa11.27□□□□□ -0.61
NDUFA3-208ENST00000422029 B8ZZF3 427 aa11.27□□□□□ -0.61
NDUFA3-208ENST00000422029 FZD6O60353 706 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms