RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SNX19Q92543 992 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 ARHGEF2Q92974 986 aaKnown RBP7.04□□□□□ -1.28
HMGN1-205ENST00000419378 FBXW5Q969U6 566 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 FAM131CQ96AQ9 280 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 BIRC7Q96CA5 298 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 PEBP4Q96S96 227 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 OMDQ99983 421 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 ACE2Q9BYF1 805 aaPredicted RBP7.04□□□□□ -1.28
HMGN1-205ENST00000419378 THAP2Q9H0W7 228 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 NEUROG2Q9H2A3 272 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 RETREG1Q9H6L5 497 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 SGK2Q9HBY8 427 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 MRPL47Q9HD33 250 aaKnown RBP7.04□□□□□ -1.28
HMGN1-205ENST00000419378 TMEM9BQ9NQ34 198 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 GPATCH2LQ9NWQ4 482 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.04□□□□□ -1.288e-15■■■□□ 14.8
HMGN1-205ENST00000419378 MYO1AQ9UBC5 1043 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 GPR160Q9UJ42 338 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 ACSL6Q9UKU0 697 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 NENFQ9UMX5 172 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.04□□□□□ -1.28
HMGN1-205ENST00000419378 SLCO1B1Q9Y6L6 691 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 ADAMTS9Q9P2N4 1935 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 A0A1B0GTW7 788 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 SCO2A0A1W2PP80 73 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 CCDC66A2RUB6 948 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 FAM47DPA6NHR8 397 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 C1QTNF3-AMACRE9PGA6 284 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 PLK4O00444 970 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 CDX4O14627 284 aaPredicted RBP7.03□□□□□ -1.28
HMGN1-205ENST00000419378 BCAT2O15382 392 aaPredicted RBP7.03□□□□□ -1.28
HMGN1-205ENST00000419378 PRPSAP2O60256 369 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 ZNF821O75541 412 aaPredicted RBP7.03□□□□□ -1.28
HMGN1-205ENST00000419378 RNF8O76064 485 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 FSBPO95073 299 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 CD160O95971 181 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 IGHV4-34P06331 123 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 CTSLP07711 333 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 PYGMP11217 842 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 RAC2P15153 192 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 GOT1P17174 413 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 MIPP30301 263 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 ADPRHP54922 357 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 TPI1P60174 286 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 GFPT1Q06210 699 aaPredicted RBP7.03□□□□□ -1.28
HMGN1-205ENST00000419378 GRIK2Q13002 908 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 POLD3Q15054 466 aaPredicted RBP7.03□□□□□ -1.28
HMGN1-205ENST00000419378 SEPT7Q16181 437 aaKnown RBP7.03□□□□□ -1.28
HMGN1-205ENST00000419378 CA9Q16790 459 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 POM121L1PQ3SYA9 428 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 AGBL4Q5VU57 503 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 FAM46CQ5VWP2 391 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 DAB2IPQ5VWQ8 1189 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 KIAA0895LQ68EN5 471 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 NCEH1Q6PIU2 408 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 Q8N1Y9 231 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 HDDC3Q8N4P3 179 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 PCDH20Q8N6Y1 951 aaKnown RBP7.03□□□□□ -1.28
HMGN1-205ENST00000419378 CHST14Q8NCH0 376 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 OR2T34Q8NGX1 318 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 PIP4K2CQ8TBX8 421 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 CCDC114Q96M63 670 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 ORAI3Q9BRQ5 295 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 SNRNP25Q9BV90 132 aaKnown RBP7.03□□□□□ -1.28
HMGN1-205ENST00000419378 GTPBP2Q9BX10 602 aaKnown RBP7.03□□□□□ -1.28
HMGN1-205ENST00000419378 MAGEH1Q9H213 219 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 CATSPERBQ9H7T0 1116 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 CATSPERZQ9NTU4 200 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 PCSK1NQ9UHG2 260 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 EIF2B4Q9UI10 523 aaKnown RBP7.03□□□□□ -1.28
HMGN1-205ENST00000419378 SARDHQ9UL12 918 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 ACTL7AQ9Y615 435 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 X6R8D5 127 aa7.03□□□□□ -1.28
HMGN1-205ENST00000419378 ASCC3Q8N3C0 2202 aaKnown RBP7.03□□□□□ -1.28
HMGN1-205ENST00000419378 CXorf51AA0A1B0GTR3 108 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 MED19A0JLT2 244 aaPredicted RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 LRRC72A6NJI9 287 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 EIF3CLB5ME19 914 aaKnown RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 C10orf142B7Z368 130 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 RNF103O00237 685 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 EEF2KO00418 725 aaKnown RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 KPNA3O00505 521 aaPredicted RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 SLC7A4O43246 635 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 PLRG1O43660 514 aaKnown RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 KDELR3O43731 214 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 MFAP3LO75121 409 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 TCF4P15884 667 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 CD27P26842 260 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 CHRNA3P32297 505 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 HTR7P34969 479 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 PCK1P35558 622 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 RECQLP46063 649 aaPredicted RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 DNA2P51530 1060 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 AFF3P51826 1226 aaKnown RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 CCNHP51946 323 aaPredicted RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 ATXN3P54252 364 aaPredicted RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 GALCP54803 685 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 GEMIN4P57678 1058 aaKnown RBP7.02□□□□□ -1.29
HMGN1-205ENST00000419378 PPP2CBP62714 309 aa7.02□□□□□ -1.29
HMGN1-205ENST00000419378 PPP2CAP67775 309 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms