RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 MAP3K19Q56UN5 1328 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 I6L893 689 aaPredicted RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 SPTLC2O15270 562 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 SPRY3O43610 288 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 LIASO43766 372 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 ATP2C2O75185 946 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 TACC1O75410 805 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 ERLIN1O75477 346 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 OAZ2O95190 189 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 YEATS4O95619 227 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 PNMA6AP0CW24 399 aaPredicted RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 TFPIP10646 304 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 PCNAP12004 261 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 DCTDP32321 178 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 TTKP33981 857 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 TNNT3P45378 269 aaPredicted RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 RFX2P48378 723 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 CLCN5P51795 746 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 POLGP54098 1239 aaPredicted RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 CASP6P55212 293 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 ROR2Q01974 943 aaKnown RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 LRMPQ12912 555 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 FOXD4Q12950 439 aaPredicted RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 PTP4A2Q12974 167 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 CAPSQ13938 189 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 LPIN1Q14693 890 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 CAMK4Q16566 473 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 MTHFSDQ2M296 383 aaKnown RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 ZNF284Q2VY69 593 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 SLC4A8Q2Y0W8 1093 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 SLC9B1Q4ZJI4 515 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 CES5AQ6NT32 575 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 Q6ZSV7 163 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 H1FNTQ75WM6 255 aaPredicted RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 MON1BQ7L1V2 547 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 ZNF367Q7RTV3 350 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 PATL1Q86TB9 770 aaKnown RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 DENND6AQ8IWF6 608 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 KIAA2013Q8IYS2 634 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 FBXL16Q8N461 479 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 IQUBQ8NA54 791 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 TEX19Q8NA77 164 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 GOLGA5Q8TBA6 731 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 KCNG4Q8TDN1 519 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 DNAAF4Q8WXU2 420 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 MRPS27Q92552 414 aaKnown RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 EXOC4Q96A65 974 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 OTULINQ96BN8 352 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 KLHL29Q96CT2 875 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 SAAL1Q96ER3 474 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 ZC3HAV1LQ96H79 300 aaKnown RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 URB1-AS1Q96HZ7 61 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 MPP4Q96JB8 637 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 PPP1R13BQ96KQ4 1090 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 APOLD1Q96LR9 279 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 KLHL15Q96M94 604 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 YME1L1Q96TA2 773 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 SF3B5Q9BWJ5 86 aaKnown RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 UBXN6Q9BZV1 441 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 FAM107BQ9H098 131 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 IL25Q9H293 177 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 IL1RAPL2Q9NP60 686 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 C20orf141Q9NUB4 165 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 HIF1ANQ9NWT6 349 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 IRAK4Q9NWZ3 460 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 ANKRD10Q9NXR5 420 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 ORC3Q9UBD5 711 aaPredicted RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 CTNNAL1Q9UBT7 734 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 HSPB7Q9UBY9 170 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 NRBP1Q9UHY1 535 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 SARDHQ9UL12 918 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 FZD10Q9ULW2 581 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 NAP1L2Q9ULW6 460 aaPredicted RBP2.75□□□□□ -1.97
VPS41-206ENST00000418457 CAMK2AQ9UQM7 478 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.75□□□□□ -1.97
VPS41-206ENST00000418457 RAI2Q9Y5P3 530 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 INSL5Q9Y5Q6 135 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 TNFRSF18Q9Y5U5 241 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 UBR1Q8IWV7 1749 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 PIK3C2AO00443 1686 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 ANKARQ7Z5J8 1434 aa2.75□□□□□ -1.97
VPS41-206ENST00000418457 ADCY9O60503 1353 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 CEMIPQ8WUJ3 1361 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 NWD1Q149M9 1564 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 UTYO14607 1347 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 MAP3K15Q6ZN16 1313 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 SLIT3O75094 1523 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 DDX60Q8IY21 1712 aaKnown RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 PARP4Q9UKK3 1724 aaKnown RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 A0A1W2PPH5 198 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 OR6C75A6NL08 312 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 TTC36A6NLP5 189 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 HSPB2A8KAH6 182 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 VWA5AO00534 786 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 RGS14O43566 566 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 LDB2O43679 373 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 PFKFB2O60825 505 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 RPS6KA5O75582 802 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms