RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 HCN4Q9Y3Q4 1203 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 RPS6KL1Q9Y6S9 549 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 PLXNA2O75051 1894 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 NCOR1O75376 2440 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 ZNF106Q9H2Y7 1883 aaKnown RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 A6NNZ2 444 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 METTL12A8MUP2 240 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 CACNB4O00305 520 aaPredicted RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 AURKAO14965 403 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 SPINT1O43278 529 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 PRAMEF1O95521 474 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 TDGF1P13385 188 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 TSHRP16473 764 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 AKT1P31749 480 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 MC4RP32245 332 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 DPP6P42658 865 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 ZNF140P52738 457 aaPredicted RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 THOP1P52888 689 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 PTPN5P54829 565 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 PTSQ03393 145 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 GTF2H3Q13889 308 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 SLMAPQ14BN4 828 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 IRF4Q15306 451 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 TEAD4Q15561 434 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 TRADDQ15628 312 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 TMEM259Q4ZIN3 620 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 FASTKD1Q53R41 847 aaKnown RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 SPANXN3Q5MJ09 141 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 AFTPHQ6ULP2 937 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 ZDHHC24Q6UX98 284 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 ZNF765Q7L2R6 523 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 TMC3Q7Z5M5 1100 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 PHYKPLQ8IUZ5 450 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 RAVER1Q8IY67 606 aaKnown RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 GSPT2Q8IYD1 628 aaKnown RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 DENND6BQ8NEG7 585 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 SEC14L1Q92503 715 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 ATOH1Q92858 354 aaPredicted RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 ULK4Q96C45 1275 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 COQ10AQ96MF6 247 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 PWWP2AQ96N64 755 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 TTC25Q96NG3 672 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 PLEKHG4BQ96PX9 1271 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 EBNA1BP2Q99848 306 aaKnown RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 ZSCAN5AQ9BUG6 496 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 RIOK2Q9BVS4 552 aaKnown RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 PHACTR1Q9C0D0 580 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 ABCG8Q9H221 673 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 EPC1Q9H2F5 836 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 ASB8Q9H765 288 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 PHPT1Q9NRX4 125 aaPredicted RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 C20orf96Q9NUD7 363 aaPredicted RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 NLE1Q9NVX2 485 aaPredicted RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 IL17CQ9P0M4 197 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 TXNDC16Q9P2K2 825 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 EIF2B4Q9UI10 523 aaKnown RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 MOSPD1Q9UJG1 213 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 KCTD3Q9Y597 815 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.44□□□□□ -1.06
TRIM48-201ENST00000417545 FAM169AQ9Y6X4 670 aa8.44□□□□□ -1.06
TRIM48-201ENST00000417545 CACNA1IQ9P0X4 2223 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 ATXN2Q99700 1313 aaKnown RBP8.43□□□□□ -1.06
TRIM48-201ENST00000417545 TRIOO75962 3097 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 FAM237BA0A1B0GVD1 139 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 A0A1W2PPC4 97 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 PRR5-ARHGAP8B1AHC4 643 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 CFAP99D6REC4 459 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 CCL22O00626 93 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 LDB2O43679 373 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 MAGEC1O60732 1142 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 USP1O94782 785 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 ASMTLO95671 621 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 RALBP11234 206 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 BPIP17213 487 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 CD27P26842 260 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 HTR1BP28222 390 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 NMBRP28336 390 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 TNFRSF8P28908 595 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 PMLP29590 882 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 MAGEA4P43358 317 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 C21orf59P57076 290 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 DCDC1P59894 354 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 CREB5Q02930 508 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 PTPRCAPQ14761 206 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 SMAD1Q15797 465 aaKnown RBP8.43□□□□□ -1.06
TRIM48-201ENST00000417545 LPAL2Q16609 132 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 LONRF1Q17RB8 773 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 PLK5Q496M5 336 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 AARS2Q5JTZ9 985 aaKnown RBP8.43□□□□□ -1.06
TRIM48-201ENST00000417545 SPDYCQ5MJ68 293 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 PMS2CLQ68D20 193 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 PDPK2PQ6A1A2 396 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 MRNIPQ6NTE8 343 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 ESRP1Q6NXG1 681 aaKnown RBP8.43□□□□□ -1.06
TRIM48-201ENST00000417545 CES3Q6UWW8 571 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 RABEPKQ7Z6M1 372 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 SDCCAG8Q86SQ7 713 aaPredicted RBP8.43□□□□□ -1.06
TRIM48-201ENST00000417545 KCNMB4Q86W47 210 aa8.43□□□□□ -1.06
TRIM48-201ENST00000417545 CBARPQ8N350 705 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms