RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 LRRC66Q68CR7 880 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 TECPR1Q7Z6L1 1165 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 VASH2Q86V25 355 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 NAGSQ8N159 534 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 ZSCAN1Q8NBB4 408 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 RCBTB1Q8NDN9 531 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 PATE1Q8WXA2 126 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 AP2M1Q96CW1 435 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 OR2M4Q96R27 311 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 POLR1EQ9GZS1 481 aaKnown RBP14.38□□□□□ -0.11
PAF1-202ENST00000416728 RCOR3Q9P2K3 495 aaPredicted RBP14.38□□□□□ -0.11
PAF1-202ENST00000416728 CD84Q9UIB8 345 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 PCDHGA4Q9Y5G9 962 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 ST14Q9Y5Y6 855 aa14.38□□□□□ -0.11
PAF1-202ENST00000416728 IGHV5-10-1A0A0J9YXX1 117 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 A0A0U1RQS6 177 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 PYGLP06737 847 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 CCL4P13236 92 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 ZNF30P17039 623 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 CD1CP29017 333 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 SSR1P43307 286 aaKnown RBP14.37□□□□□ -0.11
PAF1-202ENST00000416728 EPHB1P54762 984 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 NR1I3Q14994 352 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 HADHQ16836 314 aaKnown RBP14.37□□□□□ -0.11
PAF1-202ENST00000416728 CCDC122Q5T0U0 273 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 HGSNATQ68CP4 663 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 XKR5Q6UX68 686 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 ADAMTSL4Q6UY14 1074 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 ZNF574Q6ZN55 896 aaPredicted RBP14.37□□□□□ -0.11
PAF1-202ENST00000416728 RFLNAQ6ZTI6 216 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 DTX1Q86Y01 620 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 TEX26Q8N6G2 289 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 EXD3Q8N9H8 876 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 EXTL1Q92935 676 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 SCAMP4Q969E2 229 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 SCARF2Q96GP6 870 aaPredicted RBP14.37□□□□□ -0.11
PAF1-202ENST00000416728 CCDC74BQ96LY2 380 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 NUP85Q9BW27 656 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 ABCG8Q9H221 673 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 HAUS2Q9NVX0 235 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 TMEM98Q9Y2Y6 226 aa14.37□□□□□ -0.11
PAF1-202ENST00000416728 A0A0J9YYE9 177 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.36□□□□□ -0.11
PAF1-202ENST00000416728 STMND1H3BQB6 276 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 MYO1FO00160 1098 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 PPM1DO15297 605 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 MFSD11O43934 449 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 FZD6O60353 706 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 SOD1P00441 154 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 TRBC1P01850 177 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 CD48P09326 243 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 GARSP41250 739 aaKnown RBP14.36□□□□□ -0.11
PAF1-202ENST00000416728 LIMK2P53671 638 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 GALNT2Q10471 571 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 NFATC3Q12968 1075 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 MMRN1Q13201 1228 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 TRA2AQ13595 282 aaKnown RBP eCLIP14.36□□□□□ -0.11
PAF1-202ENST00000416728 LINC00303Q3SY05 128 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 TIGD7Q6NT04 549 aaPredicted RBP14.36□□□□□ -0.11
PAF1-202ENST00000416728 MARK2Q7KZI7 788 aaKnown RBP14.36□□□□□ -0.11
PAF1-202ENST00000416728 ZNF765Q7L2R6 523 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 PRICKLE2Q7Z3G6 844 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 TRIM74Q86UV6 250 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.36□□□□□ -0.11
PAF1-202ENST00000416728 CCDC112Q8NEF3 446 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 OR4D9Q8NGE8 314 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 SYN2Q92777 582 aaPredicted RBP14.36□□□□□ -0.11
PAF1-202ENST00000416728 SMIM14Q96QK8 99 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 ZMYND15Q9H091 742 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 KCNK4Q9NYG8 393 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 DNPEPQ9ULA0 475 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 TTLL3Q9Y4R7 772 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 HEMK1Q9Y5R4 338 aaPredicted RBP14.36□□□□□ -0.11
PAF1-202ENST00000416728 UNC13CQ8NB66 2214 aa14.36□□□□□ -0.11
PAF1-202ENST00000416728 IGHV1OR21-1A0A087WYE8 117 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 A0A1W2PQJ5 194 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 SERPING1P05155 500 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 CYP1A2P05177 515 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 CA4P22748 312 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 CES1P23141 567 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 IL4RP24394 825 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 GJC1P36383 396 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 DSC2Q02487 901 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 PTSQ03393 145 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 LRP8Q14114 963 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 NFKBIBQ15653 356 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 PYCR3Q53H96 274 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 NKAIN2Q5VXU1 208 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 ALG1LQ6GMV1 187 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 CAVIN1Q6NZI2 390 aaKnown RBP14.35□□□□□ -0.11
PAF1-202ENST00000416728 NLRP8Q86W28 1048 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 GALNT13Q8IUC8 556 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 AGBL5Q8NDL9 886 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 EXD1Q8NHP7 514 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 FAM71BQ8TC56 605 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 MAML1Q92585 1016 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 TAAR9Q96RI9 348 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 DPYSL5Q9BPU6 564 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 FAM117AQ9C073 453 aa14.35□□□□□ -0.11
PAF1-202ENST00000416728 CHKBQ9Y259 395 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms