RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 GNAZP19086 355 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 CYP2A7P20853 494 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 MED22Q15528 200 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 SLC39A12Q504Y0 691 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 TEX44Q53QW1 395 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 DET1Q7L5Y6 550 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 PEBP4Q96S96 227 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 FBRSL1Q9HCM7 1045 aaKnown RBP12.89□□□□□ -0.35
SCN1B-202ENST00000415950 UBA2Q9UBT2 640 aaPredicted RBP12.89□□□□□ -0.35
SCN1B-202ENST00000415950 ZDHHC2Q9UIJ5 367 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 EI24O14681 340 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 PCDH8O95206 1070 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 TIMM50Q3ZCQ8 353 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 RAP1GAP2Q684P5 730 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 DOK6Q6PKX4 331 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 MTSS1LQ765P7 747 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 ARMC8Q8IUR7 673 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 SERPINB11Q96P15 392 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 POLR1EQ9GZS1 481 aaKnown RBP12.89□□□□□ -0.35
SCN1B-202ENST00000415950 TLR8Q9NR97 1041 aaKnown RBP12.89□□□□□ -0.35
SCN1B-202ENST00000415950 UXTQ9UBK9 157 aaPredicted RBP12.89□□□□□ -0.35
SCN1B-202ENST00000415950 TRIM17Q9Y577 477 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 SLIT3O75094 1523 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 A0A1W2PPW3 197 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 TTC24A2A3L6 582 aaPredicted RBP12.88□□□□□ -0.35
SCN1B-202ENST00000415950 KPNA3O00505 521 aaPredicted RBP12.88□□□□□ -0.35
SCN1B-202ENST00000415950 RFPL1O75677 317 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 SIX3O95343 332 aaPredicted RBP12.88□□□□□ -0.35
SCN1B-202ENST00000415950 FTH1P02794 183 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 SCNN1GP51170 649 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 ABATP80404 500 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 SP2Q02086 613 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 STXBP5Q5T5C0 1151 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 MAP1SQ66K74 1059 aaPredicted RBP12.88□□□□□ -0.35
SCN1B-202ENST00000415950 ZCCHC8Q6NZY4 707 aaKnown RBP12.88□□□□□ -0.35
SCN1B-202ENST00000415950 HEXDCQ8WVB3 486 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 ASB8Q9H765 288 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 MARCH2Q9P0N8 246 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 NRXN3Q9Y4C0 1643 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 MYH3P11055 1940 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 ZBTB14O43829 449 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 SNAP91O60641 907 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 PDE9AO76083 593 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 H6PDO95479 791 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 UMPSP11172 480 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 GRK4P32298 578 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 NUP62P37198 522 aaPredicted RBP12.88□□□□□ -0.35
SCN1B-202ENST00000415950 ITGA1P56199 1179 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 SOWAHAQ2M3V2 549 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 RFX4Q33E94 735 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 POM121L1PQ3SYA9 428 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 CRTC3Q6UUV7 619 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 SLCO6A1Q86UG4 719 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 PDSS2Q86YH6 399 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 CLYBLQ8N0X4 340 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 HSFY1Q96LI6 401 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 CITED4Q96RK1 184 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 MINDY3Q9H8M7 445 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 EXD2Q9NVH0 621 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 SPACA6W5XKT8 324 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 B4GALT4O60513 344 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 PLOD3O60568 738 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 FYNP06241 537 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 MRPS5P82675 430 aaKnown RBP12.88□□□□□ -0.35
SCN1B-202ENST00000415950 XIAPP98170 497 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 SLC10A6Q3KNW5 377 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 NOMO2Q5JPE7 1267 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 METTL21CQ5VZV1 264 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 ZC3H3Q8IXZ2 948 aaKnown RBP12.88□□□□□ -0.35
SCN1B-202ENST00000415950 TBATAQ96M53 351 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 ADI1Q9BV57 179 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 FAM126AQ9BYI3 521 aaPredicted RBP12.88□□□□□ -0.35
SCN1B-202ENST00000415950 RAB26Q9ULW5 256 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 PCDHB5Q9Y5E4 795 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 DUOX1Q9NRD9 1551 aa12.88□□□□□ -0.35
SCN1B-202ENST00000415950 A0A087X1B8 175 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 OR51F1A6NGY5 319 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 CELF2O95319 508 aaKnown RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 ALDH2P05091 517 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 CELF3Q5SZQ8 465 aaKnown RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 IQSEC1Q6DN90 963 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 CNSTQ6PJW8 725 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 OR10Q1Q8NGQ4 319 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 OR2T34Q8NGX1 318 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 OR2T3Q8NH03 318 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 PPP1R14AQ96A00 147 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 EMILIN2Q9BXX0 1053 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 DNAJC28Q9NX36 388 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 PPEF2O14830 753 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 MDM4O15151 490 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 IPO13O94829 963 aaKnown RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 DDNO94850 711 aaPredicted RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 TPSB2P20231 275 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 ARL2P36404 184 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 ASPAP45381 313 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 CCR4P51679 360 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 AKR1D1P51857 326 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 SLC25A11Q02978 314 aaKnown RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 SLC18A2Q05940 514 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms