RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 MAML1Q92585 1016 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 OR2M4Q96R27 311 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 SUV39H2Q9H5I1 410 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 ABL1P00519 1130 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 HGFP14210 728 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 STC1P52823 247 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 PLEKHN1Q494U1 663 aaPredicted RBP6.06□□□□□ -1.44
LMBR1-204ENST00000415428 HENMT1Q5T8I9 393 aaKnown RBP6.06□□□□□ -1.44
LMBR1-204ENST00000415428 ERAP2Q6P179 960 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 LZTR1Q8N653 840 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 EHBP1Q8NDI1 1231 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 PAGE5Q96GU1 130 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 NUDCD1Q96RS6 583 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.06□□□□□ -1.44
LMBR1-204ENST00000415428 BEX4Q9NWD9 120 aaPredicted RBP6.06□□□□□ -1.44
LMBR1-204ENST00000415428 GGT7Q9UJ14 662 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 NTNG1Q9Y2I2 539 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 DOPEY1Q5JWR5 2465 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 DLATP10515 647 aaKnown RBP6.06□□□□□ -1.44
LMBR1-204ENST00000415428 MXI1P50539 228 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 POLR2LP62875 67 aaKnown RBP6.06□□□□□ -1.44
LMBR1-204ENST00000415428 STK4Q13043 487 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 CHAF1BQ13112 559 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 MFAP5Q13361 173 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 RAB43Q86YS6 212 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 PCDH12Q9NPG4 1184 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 NAP1L2Q9ULW6 460 aaPredicted RBP6.06□□□□□ -1.44
LMBR1-204ENST00000415428 OAS3Q9Y6K5 1087 aaKnown RBP6.06□□□□□ -1.44
LMBR1-204ENST00000415428 TMEM202A6NGA9 273 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 DDX3XO00571 662 aaKnown RBP eCLIP6.05□□□□□ -1.447e-9■■■□□ 15.6
LMBR1-204ENST00000415428 BUB1BO60566 1050 aaPredicted RBP6.05□□□□□ -1.44
LMBR1-204ENST00000415428 GNA14O95837 355 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 ZNF28P17035 718 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 ZC3H12AQ5D1E8 599 aaKnown RBP6.05□□□□□ -1.44
LMBR1-204ENST00000415428 PPP1R2P3Q6NXS1 205 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 NYAP1Q6ZVC0 841 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 C11orf96Q7Z7L8 435 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 ARHGAP12Q8IWW6 846 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 FAM84AQ96KN4 292 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 FER1L6-AS2Q96M78 137 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 KREMEN1Q96MU8 473 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 PSKH2Q96QS6 385 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 FOXP3Q9BZS1 431 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 ACTL8Q9H568 366 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 FZD3Q9NPG1 666 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 PHPT1Q9NRX4 125 aaPredicted RBP6.05□□□□□ -1.44
LMBR1-204ENST00000415428 AGPAT4Q9NRZ5 378 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 PIGVQ9NUD9 493 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.05□□□□□ -1.446e-7■■■□□ 18.7
LMBR1-204ENST00000415428 IL1RAPL1Q9NZN1 696 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 COPG2Q9UBF2 871 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 PADI1Q9ULC6 663 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 FARSAQ9Y285 508 aaKnown RBP6.05□□□□□ -1.44
LMBR1-204ENST00000415428 APCP25054 2843 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 SLC31A1O15431 190 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 PHACTR2O75167 634 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 ECEL1O95672 775 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 PAK4O96013 591 aaPredicted RBP6.05□□□□□ -1.44
LMBR1-204ENST00000415428 CYP1A1P04798 512 aaPredicted RBP6.05□□□□□ -1.44
LMBR1-204ENST00000415428 CMA1P23946 247 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 ADCY8P40145 1251 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 CD86P42081 329 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 MAP9Q49MG5 647 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 CBWD6Q4V339 395 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 CBWD3Q5JTY5 395 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 CBWD5Q5RIA9 395 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 KCTD16Q68DU8 428 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 JAMLQ86YT9 394 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 TRIM59Q8IWR1 403 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 FAM184AQ8NB25 1140 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 CLEC4CQ8WTT0 213 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 SCRN2Q96FV2 425 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 TIGD1Q96MW7 591 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 TRIM55Q9BYV6 548 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 AGAP14A8MT82 685 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 SOCS6O14544 535 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 F3P13726 295 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 LIG3P49916 1009 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 AP2B1P63010 937 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 IL10RBQ08334 325 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 PLCL1Q15111 1095 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 PRAMEF14Q5SWL7 426 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 ARHGEF39Q8N4T4 335 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 ANKRD20A12PQ8NF67 263 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 WDR26Q9H7D7 661 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 PDE7BQ9NP56 450 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 MTMR6Q9Y217 621 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 FLNCQ14315 2725 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 ABCA12Q86UK0 2595 aa6.05□□□□□ -1.44
LMBR1-204ENST00000415428 CNOT1A5YKK6 2376 aaKnown RBP6.04□□□□□ -1.44
LMBR1-204ENST00000415428 TLCD2A6NGC4 264 aa6.04□□□□□ -1.44
LMBR1-204ENST00000415428 TMEM63AO94886 807 aa6.04□□□□□ -1.44
LMBR1-204ENST00000415428 FMO5P49326 533 aa6.04□□□□□ -1.44
LMBR1-204ENST00000415428 AP1B1Q10567 949 aa6.04□□□□□ -1.44
LMBR1-204ENST00000415428 AIMP2Q13155 320 aaKnown RBP6.04□□□□□ -1.44
LMBR1-204ENST00000415428 POLD3Q15054 466 aaPredicted RBP6.04□□□□□ -1.44
LMBR1-204ENST00000415428 KRTCAP3Q53RY4 240 aa6.04□□□□□ -1.44
LMBR1-204ENST00000415428 RD3Q7Z3Z2 195 aa6.04□□□□□ -1.44
LMBR1-204ENST00000415428 SRLQ86TD4 932 aa6.04□□□□□ -1.44
LMBR1-204ENST00000415428 ARFGAP1Q8N6T3 406 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms