RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ASB2Q96Q27 587 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 MCCC1Q96RQ3 725 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 AGAP2Q99490 1192 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 PLCD4Q9BRC7 762 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 MUTYHQ9UIF7 546 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 GGT7Q9UJ14 662 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 ITM2BQ9Y287 266 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 TLDC2A0PJX2 215 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 SYNCRIPO60506 623 aaKnown RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 SPAG6O75602 509 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 FAM155BO75949 473 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 CHRNB1P11230 501 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 HSP90AA5PQ58FG0 334 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 THEMIS2Q5TEJ8 643 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 CRTC1Q6UUV9 634 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 TMEM92Q6UXU6 159 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 SIX5Q8N196 739 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 TBATAQ96M53 351 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 FOXQ1Q9C009 403 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 RSPH9Q9H1X1 276 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 PCDH12Q9NPG4 1184 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 C20orf96Q9NUD7 363 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 WNT16Q9UBV4 365 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 B4GALT6Q9UBX8 382 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 FBXL21Q9UKT6 434 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 FNDC3AQ9Y2H6 1198 aaKnown RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 PSAT1Q9Y617 370 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 DNAH14Q0VDD8 3507 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 FAM159BA6NKW6 160 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 A8MUI8 341 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 UPK3BL1B0FP48 263 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 UPK3BL2E5RIL1 263 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 MID1O15344 667 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 SPINT1O43278 529 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 CRTAMO95727 393 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 ITGB7P26010 798 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 STX2P32856 288 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 MRPS21P82921 87 aaKnown RBP15.5■□□□□ 0.07
SHMT2-202ENST00000414700 SF3A3Q12874 501 aaKnown RBP eCLIP15.5■□□□□ 0.076e-8■■□□□ 12.4
SHMT2-202ENST00000414700 CMPK2Q5EBM0 449 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 LRRC66Q68CR7 880 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 USP45Q70EL2 814 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 KCNMB4Q86W47 210 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 CTAGE3PQ8IX95 158 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 PPM1NQ8N819 430 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 KCNV2Q8TDN2 545 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 HDAC10Q969S8 669 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 NAF1Q96HR8 494 aaKnown RBP15.5■□□□□ 0.07
SHMT2-202ENST00000414700 LYSMD1Q96S90 227 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 CYTH2Q99418 400 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 TSC22D3Q99576 134 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 FAM167BQ9BTA0 163 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 GPR63Q9BZJ6 419 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 ZFYVE1Q9HBF4 777 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 C2orf42Q9NWW7 574 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 DKK3Q9UBP4 350 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 SERGEFQ9UGK8 458 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 C2orf81A6NN90 581 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 FOXO6A8MYZ6 492 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 MAN2B1O00754 1011 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 GSTA2P09210 222 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 LPOP22079 712 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-202ENST00000414700 DRD3P35462 400 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 HMGCLP35914 325 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 POLR2LP62875 67 aaKnown RBP15.5■□□□□ 0.07
SHMT2-202ENST00000414700 FZD5Q13467 585 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 STAT4Q14765 748 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 CST6Q15828 149 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 FBXO43Q4G163 708 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 SDE2Q6IQ49 451 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 RFLNAQ6ZTI6 216 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 ASRGL1Q7L266 308 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 AADATQ8N5Z0 425 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 PAFAH2Q99487 392 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 TMEM109Q9BVC6 243 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 IL17CQ9P0M4 197 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 TBK1Q9UHD2 729 aa15.5■□□□□ 0.07
SHMT2-202ENST00000414700 TTC28Q96AY4 2481 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 WDFY4Q6ZS81 3184 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 RASGRF2O14827 1237 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 GPR39O43194 453 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 PAPSS2O95340 614 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-202ENST00000414700 PRSS56P0CW18 603 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 ROR2Q01974 943 aaKnown RBP15.49■□□□□ 0.07
SHMT2-202ENST00000414700 PTSQ03393 145 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 PRKCQQ04759 706 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 ACVR1Q04771 509 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 GAS6Q14393 721 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 UBXN2BQ14CS0 331 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 KIAA0930Q6ICG6 404 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-202ENST00000414700 PTAR1Q7Z6K3 402 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-202ENST00000414700 DSG4Q86SJ6 1040 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 GJD3Q8N144 294 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 FLCNQ8NFG4 579 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 STYXQ8WUJ0 223 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 CDKN2AIPNLQ96HQ2 116 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 NLE1Q9NVX2 485 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-202ENST00000414700 HACD3Q9P035 362 aa15.49■□□□□ 0.07
SHMT2-202ENST00000414700 A0A1W2PQ67 120 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 ADRB3P13945 408 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms