RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	NOA1	Q8NC60	698 aa	Known RBP	13.12	□□□□□ -0.31
SF1-206	ENST00000413725	STYX	Q8WUJ0	223 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	EID2B	Q96D98	161 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	KLHDC7B	Q96G42	594 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	SERPINB12	Q96P63	405 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	PLEKHG4B	Q96PX9	1271 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	C19orf43	Q9BQ61	176 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	LRRC1	Q9BTT6	524 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	ABCG8	Q9H221	673 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	DPH5	Q9H2P9	285 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	FAM83D	Q9H4H8	585 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	BPIFA1	Q9NP55	256 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	TMEM74B	Q9NUR3	256 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	WHRN	Q9P202	907 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	RAPGEFL1	Q9UHV5	662 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	ANAPC5	Q9UJX4	755 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	CA5B	Q9Y2D0	317 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	SNX24	Q9Y343	169 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.12	□□□□□ -0.31
SF1-206	ENST00000413725	PTPRZ1	P23471	2315 aa	Predicted RBP	13.12	□□□□□ -0.31
SF1-206	ENST00000413725	GOLGA4	Q13439	2230 aa	Known RBP	13.12	□□□□□ -0.31
SF1-206	ENST00000413725	USP34	Q70CQ2	3546 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	ASCC3	Q8N3C0	2202 aa	Known RBP	13.11	□□□□□ -0.31
SF1-206	ENST00000413725	POM121B	A6NF01	834 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	VILL	O15195	856 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	LDB2	O43679	373 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	BUD23	O43709	281 aa	Known RBP	13.11	□□□□□ -0.31
SF1-206	ENST00000413725	LRP3	O75074	770 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	BPI	P17213	487 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	MGAT1	P26572	445 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	TEAD1	P28347	426 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	SPAM1	P38567	509 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	HADHA	P40939	763 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	GPR1	P46091	355 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	RABIF	P47224	123 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	ZNF140	P52738	457 aa	Predicted RBP	13.11	□□□□□ -0.31
SF1-206	ENST00000413725	C21orf59	P57076	290 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	SLC7A5	Q01650	507 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	CCDC38	Q502W7	563 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	PCID2	Q5JVF3	399 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	ALS2CL	Q60I27	953 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.11	□□□□□ -0.31
SF1-206	ENST00000413725	PNCK	Q6P2M8	343 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	CASC4	Q6P4E1	433 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	RFLNA	Q6ZTI6	216 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	NLRP9	Q7RTR0	991 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	CAND1	Q86VP6	1230 aa	Known RBP	13.11	□□□□□ -0.31
SF1-206	ENST00000413725	DCP2	Q8IU60	420 aa	Known RBP	13.11	□□□□□ -0.31
SF1-206	ENST00000413725	OR4K2	Q8NGD2	314 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	PTCD2	Q8WV60	388 aa	Known RBP	13.11	□□□□□ -0.31
SF1-206	ENST00000413725	SCAMP4	Q969E2	229 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	HINFP	Q9BQA5	517 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	ZSCAN5A	Q9BUG6	496 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	RIOK2	Q9BVS4	552 aa	Known RBP	13.11	□□□□□ -0.31
SF1-206	ENST00000413725	SPATA16	Q9BXB7	569 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	NUSAP1	Q9BXS6	441 aa	Known RBP	13.11	□□□□□ -0.31
SF1-206	ENST00000413725	MBNL1	Q9NR56	388 aa	Known RBP	13.11	□□□□□ -0.31
SF1-206	ENST00000413725	SAMD15	Q9P1V8	674 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.11	□□□□□ -0.31
SF1-206	ENST00000413725	TCAF1	Q9Y4C2	921 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	SLCO1B1	Q9Y6L6	691 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725	MYO15A	Q9UKN7	3530 aa		13.11	□□□□□ -0.31
SF1-206	ENST00000413725		A0A1W2PR77	199 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	MROH6	A6NGR9	719 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	SDR42E2	A6NKP2	422 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725		H0Y8X5	98 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	KHNYN	O15037	678 aa	Known RBP	13.1	□□□□□ -0.31
SF1-206	ENST00000413725	THEGL	P0DJG4	465 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	CSNK1E	P49674	416 aa	Known RBP	13.1	□□□□□ -0.31
SF1-206	ENST00000413725	THOP1	P52888	689 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	DRG2	P55039	364 aa	Known RBP	13.1	□□□□□ -0.31
SF1-206	ENST00000413725	YPEL5	P62699	121 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	CAV1	Q03135	178 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	PTK2B	Q14289	1009 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	INPP5A	Q14642	412 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	SKIDA1	Q1XH10	827 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	TRIM61	Q5EBN2	209 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	DNAJC21	Q5F1R6	531 aa	Known RBP	13.1	□□□□□ -0.31
SF1-206	ENST00000413725	PLA2G2C	Q5R387	149 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	HENMT1	Q5T8I9	393 aa	Known RBP	13.1	□□□□□ -0.31
SF1-206	ENST00000413725	PDPK2P	Q6A1A2	396 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	SLC23A3	Q6PIS1	610 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725		Q6ZSR6	202 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	PDIK1L	Q8N165	341 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	TRAM1L1	Q8N609	369 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	PLA2G15	Q8NCC3	412 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	GPR26	Q8NDV2	337 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	RUBCN	Q92622	972 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	PEX13	Q92968	403 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	DNAJC1	Q96KC8	554 aa	Known RBP	13.1	□□□□□ -0.31
SF1-206	ENST00000413725	BMF	Q96LC9	184 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	WDR26	Q9H7D7	661 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	MRM3	Q9HC36	420 aa	Known RBP	13.1	□□□□□ -0.31
SF1-206	ENST00000413725	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.1	□□□□□ -0.31
SF1-206	ENST00000413725	SYBU	Q9NX95	663 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	APPL1	Q9UKG1	709 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	RIMKLB	Q9ULI2	386 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	SLC6A14	Q9UN76	642 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	KCTD3	Q9Y597	815 aa		13.1	□□□□□ -0.31
SF1-206	ENST00000413725	FRYL	O94915	3013 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms